RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 FBXW4P57775 412 aa13.6□□□□□ -0.23
CAPN3-207ENST00000397200 CXADRP78310 365 aa13.6□□□□□ -0.23
CAPN3-207ENST00000397200 IL20RBQ6UXL0 311 aa13.6□□□□□ -0.23
CAPN3-207ENST00000397200 ZNF620Q6ZNG0 422 aa13.6□□□□□ -0.23
CAPN3-207ENST00000397200 LINC00696Q6ZRV3 163 aa13.6□□□□□ -0.23
CAPN3-207ENST00000397200 NUP54Q7Z3B4 507 aa13.6□□□□□ -0.23
CAPN3-207ENST00000397200 KDF1Q8NAX2 398 aaPredicted RBP13.6□□□□□ -0.23
CAPN3-207ENST00000397200 OR5M3Q8NGP4 307 aa13.6□□□□□ -0.23
CAPN3-207ENST00000397200 NDNFQ8TB73 568 aa13.6□□□□□ -0.23
CAPN3-207ENST00000397200 FAM46AQ96IP4 442 aaKnown RBP13.6□□□□□ -0.23
CAPN3-207ENST00000397200 HOXD1Q9GZZ0 328 aa13.6□□□□□ -0.23
CAPN3-207ENST00000397200 HPF1Q9NWY4 346 aa13.6□□□□□ -0.23
CAPN3-207ENST00000397200 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.6□□□□□ -0.23
CAPN3-207ENST00000397200 DMXL2Q8TDJ6 3036 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 CHD8Q9HCK8 2581 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 NPIPA5A0A0B4J1W7 369 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 KDM4EB2RXH2 506 aaPredicted RBP13.59□□□□□ -0.23
CAPN3-207ENST00000397200 NPIPA7E9PJI5 369 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 UTS2O95399 124 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 NTN1O95631 604 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 NPIPA8P0DM63 369 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 PRG2P13727 222 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 CASRP41180 1078 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 GAS1P54826 345 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 NCS1P62166 190 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 NTRK2Q16620 822 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 ZSWIM7Q19AV6 140 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 ZNF791Q3KP31 576 aaPredicted RBP13.59□□□□□ -0.23
CAPN3-207ENST00000397200 GPALPP1Q8IXQ4 340 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 RNF113BQ8IZP6 322 aaKnown RBP13.59□□□□□ -0.23
CAPN3-207ENST00000397200 FDCSPQ8NFU4 85 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 TMEM163Q8TC26 289 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 TMEM255BQ8WV15 326 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 RPL3LQ92901 407 aaKnown RBP13.59□□□□□ -0.23
CAPN3-207ENST00000397200 BORCS5Q969J3 196 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 TMCO6Q96DC7 493 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 LGALS12Q96DT0 336 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 TMEM80Q96HE8 168 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 TAPBPLQ9BX59 468 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 TSSK6Q9BXA6 273 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 PRRG3Q9BZD7 231 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 DSN1Q9H410 356 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 ARMC7Q9H6L4 198 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 ZNF552Q9H707 407 aaPredicted RBP13.59□□□□□ -0.23
CAPN3-207ENST00000397200 PALMDQ9NP74 551 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 UBQLN4Q9NRR5 601 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 TAS2R16Q9NYV7 291 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 TVP23BQ9NYZ1 205 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 CNIH4Q9P003 139 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 OSGIN1Q9UJX0 560 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 SLC7A7Q9UM01 511 aa13.59□□□□□ -0.23
CAPN3-207ENST00000397200 A0A1B0GVG6 124 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 TP53I11O14683 189 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 PIP5K1CO60331 668 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 ICOSLGO75144 302 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 CEACAM4O75871 244 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 HPGDP15428 266 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 CYB561P49447 251 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 ATP12AP54707 1039 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 VBP1P61758 197 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 MFAP5Q13361 173 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 OR1Q1Q15612 314 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF141Q15928 474 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 DESI1Q6ICB0 168 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF613Q6PF04 617 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 NRMQ8IXM6 262 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF527Q8NB42 609 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 TTC9Q92623 222 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 OSTF1Q92882 214 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 HGDQ93099 445 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF582Q96NG8 517 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-207ENST00000397200 KRCC1Q9NPI7 259 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-207ENST00000397200 MED17Q9NVC6 651 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 DIMT1Q9UNQ2 313 aaKnown RBP13.58□□□□□ -0.24
CAPN3-207ENST00000397200 CDH10Q9Y6N8 788 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 PMF1-BGLAPU3KQ54 211 aa13.58□□□□□ -0.24
CAPN3-207ENST00000397200 ANKRD11Q6UB99 2663 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-207ENST00000397200 EFCAB9A8MZ26 197 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 SCDO00767 359 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 CDK2AP1O14519 115 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 PRODHO43272 600 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 TLX2O43763 284 aaPredicted RBP13.57□□□□□ -0.24
CAPN3-207ENST00000397200 AIREO43918 545 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 ENDOUP21128 410 aaKnown RBP13.57□□□□□ -0.24
CAPN3-207ENST00000397200 TBXA2RP21731 343 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 GADD45AP24522 165 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 GRK5P34947 590 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 RGS6P49758 472 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 BMXP51813 675 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 OC90Q02509 493 aaPredicted RBP13.57□□□□□ -0.24
CAPN3-207ENST00000397200 DOC2BQ14184 412 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 ARMCX4Q5H9R4 360 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 PDZK1Q5T2W1 519 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF468Q5VIY5 522 aaPredicted RBP13.57□□□□□ -0.24
CAPN3-207ENST00000397200 WDR88Q6ZMY6 472 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 RRM2BQ7LG56 351 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 CYP4Z2PQ8N1L4 340 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF614Q8N883 585 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 OR10G3Q8NGC4 313 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 OR4Q3Q8NH05 313 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms