RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 C3orf38Q5JPI3 329 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 ARHGAP11AQ6P4F7 1023 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 CPOQ8IVL8 374 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 CACTIN-AS1Q8N1I8 211 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 OR5M3Q8NGP4 307 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 M1APQ8TC57 530 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 GPR119Q8TDV5 335 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 DUSP19Q8WTR2 217 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 MND1Q9BWT6 205 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 TAPBPLQ9BX59 468 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 SPRY4Q9C004 299 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 RACGAP1Q9H0H5 632 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 MMP25Q9NPA2 562 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 LSM2Q9Y333 95 aaKnown RBP10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 PCDHGB6Q9Y5F9 930 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 PCDHGA3Q9Y5H0 932 aa10.43□□□□□ -0.74
SMARCAL1-203ENST00000392128 PLD2O14939 933 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 OR2J2O76002 312 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 DKK1O94907 266 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 PPP1R3DO95685 299 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 NUDT14O95848 222 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 MT-CO3P00414 261 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 RAB40ALP0C0E4 278 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 GP1BBP13224 206 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 SUMO3P55854 103 aaPredicted RBP10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 PRPS1P60891 318 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 C17orf67Q0P5P2 114 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 LRRC17Q8N6Y2 441 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 NANOGP1Q8N7R0 232 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 PROKR2Q8NFJ6 384 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 OR5M11Q96RB7 305 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 H2AFY2Q9P0M6 372 aaPredicted RBP10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 CHRNA9Q9UGM1 479 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 OSGIN1Q9UJX0 560 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 CCDC187A0A096LP49 1063 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 PMS2P1A4D2B8 440 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 RIIAD1A6NNX1 92 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 LRRN3E7EW58 273 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 M0R3G1 203 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 SOCS6O14544 535 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 SLC22A1O15245 554 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 LRP3O75074 770 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 ZNF3P17036 446 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 HK1P19367 917 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 CXCR1P25024 350 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 POLR2HP52434 150 aaKnown RBP10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 CLDN6P56747 220 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 AQP6Q13520 282 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 QPRTQ15274 297 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 MED22Q15528 200 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 NTRK2Q16620 822 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 COL28A1Q2UY09 1125 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 ANKDD1AQ495B1 522 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 ARMCX4Q5H9R4 360 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 ZNF362Q5T0B9 420 aaPredicted RBP10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 SLC35F1Q5T1Q4 408 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 NIPAL3Q6P499 406 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 PLBD1Q6P4A8 553 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 DPY19L2P2Q6ZN68 376 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 GRINAQ7Z429 371 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 BBS1Q8NFJ9 593 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 OR11G2Q8NGC1 345 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 ZFAND2BQ8WV99 257 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 RASL10BQ96S79 203 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 GPX7Q96SL4 187 aaPredicted RBP10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 MGLLQ99685 303 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 DCUN1D5Q9BTE7 237 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 CLEC2DQ9UHP7 191 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 EXOGQ9Y2C4 368 aaKnown RBP10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 HIF3AQ9Y2N7 669 aa10.42□□□□□ -0.74
SMARCAL1-203ENST00000392128 CACNA1HO95180 2353 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 ANKUB1A6NFN9 424 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 FAM183AA6NL82 134 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 C9orf172C9J069 976 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 GMFGO60234 142 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 IFNGP01579 166 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 ASAH2BP0C7U1 165 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 ZNF24P17028 368 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 MYL12AP19105 171 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 ARMC4Q5T2S8 1044 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 NDUFAF7Q7L592 441 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 TIPARPQ7Z3E1 657 aaKnown RBP10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 SPACA9Q96E40 222 aaPredicted RBP10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 NANSQ9NR45 359 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 TAS2R10Q9NYW0 307 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 TCFL5Q9UL49 500 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 EXOSC1Q9Y3B2 195 aaKnown RBP10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 SDK2Q58EX2 2172 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 A0A1W2PNU3 283 aaPredicted RBP10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 MCIDASD6RGH6 385 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 PRR23D1E9PI22 279 aaPredicted RBP10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 MYL12BO14950 172 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 PRR23D2P0DMB1 279 aaPredicted RBP10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 NR4A1P22736 598 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 NOS3P29474 1203 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 HTR3AP46098 478 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 RGS6P49758 472 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 DLX5P56178 289 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 ITGADQ13349 1161 aa10.41□□□□□ -0.74
SMARCAL1-203ENST00000392128 SPHARQ15513 63 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms