RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 UBXN8O00124 270 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 HAT1O14929 419 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 TSPAN12O95859 305 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 IGKV3-15P01624 115 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 IGHV3-23P01764 117 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 GIG44P09565 113 aaPredicted RBP3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 NCK1P16333 377 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 KLK2P20151 261 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 CDH4P55283 916 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 KLRB1Q12918 225 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 SLC15A2Q16348 729 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 ACOT7LQ6ZUV0 252 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 VRK2Q86Y07 508 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 ABCA7Q8IZY2 2146 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 OR2L13Q8N349 312 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 FTMTQ8N4E7 242 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 TMEM252Q8N6L7 170 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 ALLCQ8N6M5 410 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 C14orf178Q8N769 122 aaPredicted RBP3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 OR8J1Q8NGP2 316 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 SCFD1Q8WVM8 642 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 C10orf35Q96D05 121 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 PGLYRP4Q96LB8 373 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 AZI2Q9H6S1 392 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 VCPKMTQ9H867 229 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 TREM2Q9NZC2 230 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 CD274Q9NZQ7 290 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 BTNL2Q9UIR0 455 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 IFT52Q9Y366 437 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 A0A1B0GVL5 298 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 ZNF264O43296 627 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 PRKAB2O43741 272 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 RAMP3O60896 148 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 HMMRO75330 724 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 SRSF10O75494 262 aaKnown RBP3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 SERPINA3P01011 423 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 HSPB1P04792 205 aaKnown RBP3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 P0C879 139 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 RBMY1CP0DJD4 496 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 MX1P20591 662 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 PBLDP30039 288 aaPredicted RBP3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 RFC4P35249 363 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 RGRP47804 291 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 SEC61GP60059 68 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 OGDHQ02218 1023 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 ZNF45Q02386 682 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 RABL6Q3YEC7 729 aaPredicted RBP3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 EOGTQ5NDL2 527 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 TAS2R42Q7RTR8 314 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 OR2AP1Q8NGE2 309 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 MARC2Q969Z3 335 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 TPD52L3Q96J77 140 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 IFT74Q96LB3 600 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 CNOT6LQ96LI5 555 aaKnown RBP3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 NPY6RQ99463 290 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 RNF2Q99496 336 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 RNF126Q9BV68 326 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 PKIBQ9C010 78 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 YY1AP1Q9H869 796 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 MARCH5Q9NX47 278 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 SUN2Q9UH99 717 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 NPTNQ9Y639 398 aa3.98□□□□□ -1.77
RNU6-40P-201ENST00000384254 SH3TC1Q8TE82 1336 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 LRRK1Q38SD2 2015 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 EPOPA6NHQ4 379 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 K7N7A8 449 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 NBR2O15453 112 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 OXSR1O95747 527 aaPredicted RBP3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 RPS2P15880 293 aaKnown RBP3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 ZBTB25P24278 435 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 IL12AP29459 219 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 AQP1P29972 269 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 SHMT2P34897 504 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 DUSP3P51452 185 aaPredicted RBP3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 CRYBB1P53674 252 aaPredicted RBP3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 BIDP55957 195 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 ACTR3P61158 418 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 ARFRP1Q13795 201 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 SSX2Q16385 188 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 KCTD21Q4G0X4 260 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 C1orf220Q5T0J3 134 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 PGAP1Q75T13 922 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 BBS1Q8NFJ9 593 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 DNAJA4Q8WW22 397 aaPredicted RBP3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 TUBGCP3Q96CW5 907 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 TBX15Q96SF7 602 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 PLIN2Q99541 437 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 KLHDC3Q9BQ90 382 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 EBF4Q9BQW3 602 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 RIOK1Q9BRS2 568 aaKnown RBP3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 PLGRKTQ9HBL7 147 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 TP53TG3Q9ULZ0 132 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 N6AMT1Q9Y5N5 214 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 MMP24Q9Y5R2 645 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 PLEKHH1Q9ULM0 1364 aa3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 RAI1Q7Z5J4 1906 aaPredicted RBP3.97□□□□□ -1.77
RNU6-40P-201ENST00000384254 TCRBV9S1A1TA0A576 114 aa3.96□□□□□ -1.78
RNU6-40P-201ENST00000384254 ARHGEF35A5YM69 484 aa3.96□□□□□ -1.78
RNU6-40P-201ENST00000384254 BTBD17A6NE02 478 aa3.96□□□□□ -1.78
RNU6-40P-201ENST00000384254 ZFP92A6NM28 416 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms