RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ZNF529Q6P280 563 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 FAM83HQ6ZRV2 1179 aaPredicted RBP13.17□□□□□ -0.3
TRIM13-202ENST00000378182 METTL25Q8N6Q8 603 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 SLC12A9Q9BXP2 914 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 ABCG5Q9H222 651 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 ELOVL3Q9HB03 270 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 TMEM269A0A1B0GVZ9 245 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 SHHQ15465 462 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 S100A7AQ86SG5 101 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 ISOC1Q96CN7 298 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 PADI1Q9ULC6 663 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 DOT1LQ8TEK3 1739 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 IGHEP01854 428 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 TP53P04637 393 aaPredicted RBP13.17□□□□□ -0.3
TRIM13-202ENST00000378182 CLEC14AQ86T13 490 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 OR10X1Q8NGY0 326 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 OCSTAMPQ9BR26 566 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 YTHDF1Q9BYJ9 559 aaKnown RBP13.17□□□□□ -0.3
TRIM13-202ENST00000378182 MICAQ29983 383 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 FAM185AQ8N0U4 392 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 METTL4Q8N3J2 472 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 NTMT1Q9BV86 223 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 UBQLN4Q9NRR5 601 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 APOC3P02656 99 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 PKLRP30613 574 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 VEGFCP49767 419 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 RBM12BQ8IXT5 1001 aaKnown RBP13.17□□□□□ -0.3
TRIM13-202ENST00000378182 GPR148Q8TDV2 347 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 MIB2Q96AX9 1013 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 BPIFA2Q96DR5 249 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 SMIM14Q96QK8 99 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 TIMM29Q9BSF4 260 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 UFSP2Q9NUQ7 469 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 TMEM59LQ9UK28 342 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 PCDHGA7Q9Y5G6 932 aa13.17□□□□□ -0.3
TRIM13-202ENST00000378182 A0A1B0GTW7 788 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 SOBPA7XYQ1 873 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 NOTOA8MTQ0 251 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 NRG2O14511 850 aaPredicted RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 GABRA4P48169 554 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 GDPD3Q7L5L3 318 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 C3orf58Q8NDZ4 430 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 HAPLN2Q9GZV7 340 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 AIG1Q9NVV5 245 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 ADAMTS6Q9UKP5 1117 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 SDHDO14521 159 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 ADAM23O75077 832 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 CALCBP10092 127 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 DNAJB1P25685 340 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 HTR1EP28566 365 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 AHRP35869 848 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 TLE1Q04724 770 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 RNLSQ5VYX0 342 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 PAQR8Q8TEZ7 354 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 TECTBQ96PL2 329 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 PPIL3Q9H2H8 161 aaKnown RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 LTBP3Q9NS15 1303 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 J3KTA2 159 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 RFC3P40938 356 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 CYB561P49447 251 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 SLC9A3R2Q15599 337 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 CTC1Q2NKJ3 1217 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 NPSR1Q6W5P4 371 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 TFAP2CQ92754 450 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 ZBED3Q96IU2 234 aaPredicted RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 PTBP2Q9UKA9 531 aaKnown RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 MCRIP1C9JLW8 97 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 BOLA2-SMG1P6H3BVE0 249 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 SLC22A5O76082 557 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 CTSCP53634 463 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 DUSP2Q05923 314 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 TMEM185AQ8NFB2 350 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 FNDC9Q8TBE3 224 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 NKX3-1Q99801 234 aaPredicted RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 SLC6A20Q9NP91 592 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 ANTXRLA6NF34 631 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 ITGB2P05107 769 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 YRDCQ86U90 279 aaKnown RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 OR7G1Q8NGA0 311 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 SAMD10Q9BYL1 202 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 NOX3Q9HBY0 568 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 SMCO4Q9NRQ5 59 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 CCM2LQ9NUG4 571 aaPredicted RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 A0A1W2PQL4 384 aaPredicted RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 ZNF593O00488 134 aaPredicted RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 NKX6-1P78426 367 aaPredicted RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 ESPNLQ6ZVH7 1005 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 LINC00346Q8IVM7 164 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 RHBDF1Q96CC6 855 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 SPIN2AQ99865 258 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 SPIN2BQ9BPZ2 258 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 PIGQQ9BRB3 760 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 QRSL1Q9H0R6 528 aaKnown RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 EGLN3Q9H6Z9 239 aa13.16□□□□□ -0.3
TRIM13-202ENST00000378182 DDX31Q9H8H2 851 aaKnown RBP13.16□□□□□ -0.3
TRIM13-202ENST00000378182 H0YAE9 185 aa13.15□□□□□ -0.3
TRIM13-202ENST00000378182 KCNK5O95279 499 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms