RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 MMP9P14780 707 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 GPR68Q15743 365 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 TSNAXQ99598 290 aaKnown RBP4.6□□□□□ -1.67
PCDH9-201ENST00000377861 F11P03951 625 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 IFI30P13284 250 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF582Q96NG8 517 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-201ENST00000377861 PLEKHA1Q9HB21 404 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 SLC52A3Q9NQ40 469 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 SIRT7Q9NRC8 400 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 ERVK13-1Q9NX77 482 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 FBXL2Q9UKC9 423 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF175Q9Y473 711 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 hCG_2039718K7EN88 272 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 AURKAO14965 403 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 TIMP1P01033 207 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 ADORA3P0DMS8 318 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 HSPB3Q12988 150 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 MARCH4Q9P2E8 410 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-201ENST00000377861 CPED1A4D0V7 1026 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 MBPP02686 304 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 CXCL10P02778 98 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 GDF6Q6KF10 455 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 FDX2Q6P4F2 183 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 NEIL2Q969S2 332 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 PKMYT1Q99640 499 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 AMBRA1Q9C0C7 1298 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 NUDT7P0C024 238 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 RTL8BQ17RB0 113 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 SPACA7Q96KW9 195 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM184BQ9Y519 407 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 EPXP11678 715 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 RPS19P39019 145 aaKnown RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 PFN3P60673 137 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 GPR156Q8NFN8 814 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 SFXN1Q9H9B4 322 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 GLCEO94923 617 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 CNR1P21554 472 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 HSD11B1P28845 292 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 C12orf73Q69YU5 71 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 LINC00346Q8IVM7 164 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 RERGLQ9H628 205 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 LEFTY2O00292 366 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 TSPAN15O95858 294 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 FUT4P22083 530 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 IRF3Q14653 427 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 NRN1LQ496H8 165 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 HAGHLQ6PII5 290 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 OR2A12Q8NGT7 310 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 GASTP01350 101 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 RPA2P15927 270 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 FUZQ9BT04 418 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 OR51V1Q9H2C8 321 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 CYP17A1P05093 508 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 ZMAT1Q5H9K5 638 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 DESI1Q6ICB0 168 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF687Q8N1G0 1237 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 MMP24Q9Y5R2 645 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 TRAV36DV7A0A075B6V5 113 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 WISP3O95389 354 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF806P0C7X5 589 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 H1FNTQ75WM6 255 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 TGM7Q96PF1 710 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 INTS14Q96SY0 518 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF395Q9H8N7 513 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 TSTD3H0UI37 97 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 PSMB6P28072 239 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 OPN5Q6U736 354 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 TRMT10AQ8TBZ6 339 aaKnown RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 BPIFA1Q9NP55 256 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 MOSPD1Q9UJG1 213 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 HIF3AQ9Y2N7 669 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 SNX11Q9Y5W9 270 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 GMDSO60547 372 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 PRAMEF19Q5SWL8 479 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 CPOQ8IVL8 374 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 KCNE4Q8WWG9 221 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 FBXL20Q96IG2 436 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 CCSER2Q9H7U1 834 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 SLC2A9Q9NRM0 540 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 OR51B4Q9Y5P0 310 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 LEFTY1O75610 366 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 PNLIPRP2P54317 469 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 GLYR1Q49A26 553 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 SOWAHCQ53LP3 525 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 SFXN4Q6P4A7 337 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 DRAM2Q6UX65 266 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 YIPF7Q8N8F6 280 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM229BQ8NBD8 167 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 MYLIPQ8WY64 445 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF707Q96C28 371 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-201ENST00000377861 NTNG2Q96CW9 530 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 KCNA7Q96RP8 456 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 TIAM2Q8IVF5 1701 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 SURF4O15260 269 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 HCRTR2O43614 444 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 MT-CO1P00395 513 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 ADRB3P13945 408 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 TAS2R30P59541 319 aa4.59□□□□□ -1.67
PCDH9-201ENST00000377861 KIAA1024LP59773 190 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms