RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TMEM72A0PK05 275 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 GDF1P27539 372 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 CAV3P56539 151 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 DUSP5Q16690 384 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 TMEM176BQ3YBM2 270 aaPredicted RBP12.65□□□□□ -0.38
C9orf47-203ENST00000375851 ZNF385BQ569K4 471 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 CCSAPQ6IQ19 270 aaPredicted RBP12.65□□□□□ -0.38
C9orf47-203ENST00000375851 RPL22L1Q6P5R6 122 aaKnown RBP12.65□□□□□ -0.38
C9orf47-203ENST00000375851 SLC35F3Q8IY50 421 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 PARP16Q8N5Y8 322 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 CLEC1AQ8NC01 280 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 HYLS1Q96M11 299 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 ZNF578Q96N58 590 aaPredicted RBP12.65□□□□□ -0.38
C9orf47-203ENST00000375851 OR5M11Q96RB7 305 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 ALG12Q9BV10 488 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 IKZF5Q9H5V7 419 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 KCNN3Q9UGI6 736 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 POLHQ9Y253 713 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 MMACHCQ9Y4U1 282 aa12.65□□□□□ -0.38
C9orf47-203ENST00000375851 CPNE6O95741 557 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 IGHG1P01857 330 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 RAB3AP20336 220 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 MMP11P24347 488 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 FOXK1P85037 733 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 GNMTQ14749 295 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 P2RY14Q15391 338 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 SF3A2Q15428 464 aaKnown RBP12.64□□□□□ -0.39
C9orf47-203ENST00000375851 C9orf50Q5SZB4 431 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 SLX4IPQ5VYV7 408 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 ZFPM2Q8WW38 1151 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 MRGPRX1Q96LB2 322 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 LYRM4Q9HD34 91 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 MCTS1Q9ULC4 181 aaKnown RBP12.64□□□□□ -0.39
C9orf47-203ENST00000375851 LOC105369274A0A096LPK9 316 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 UTS2O95399 124 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 FPR3P25089 353 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 NXNL2Q5VZ03 156 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 C3orf33Q6P1S2 294 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 BCDIN3DQ7Z5W3 292 aaKnown RBP12.64□□□□□ -0.39
C9orf47-203ENST00000375851 OR4N4Q8N0Y3 316 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 CSNK2A3Q8NEV1 391 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 CCL4L1Q8NHW4 92 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 SYNPRQ8TBG9 265 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 AIFM2Q9BRQ8 373 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 DPCDQ9BVM2 203 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-203ENST00000375851 PHF7Q9BWX1 381 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-203ENST00000375851 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 POU2F3Q9UKI9 436 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 CACNG2Q9Y698 323 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 H7C1C5 153 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 LCMT2O60294 686 aaKnown RBP12.64□□□□□ -0.39
C9orf47-203ENST00000375851 TEAD1P28347 426 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 GABRA5P31644 462 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 TRHRP34981 398 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-203ENST00000375851 LCN6P62502 163 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 FOXK2Q01167 660 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 C14orf28Q4W4Y0 310 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 PRAMEF20Q5VT98 475 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 CD300LGQ6UXG3 332 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 SLC46A3Q7Z3Q1 461 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 OR5D14Q8NGL3 314 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 NMNAT3Q96T66 252 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 CDH20Q9HBT6 801 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 SPEF1Q9Y4P9 236 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 SHROOM3Q8TF72 1996 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 SUSD5O60279 629 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 HRGP04196 525 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 ARSBP15848 533 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 PPP2CBP62714 309 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 PPP2CAP67775 309 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 RELAQ04206 551 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 TMEM196Q5HYL7 178 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 LILRA6Q6PI73 481 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 OR51T1Q8NGJ9 327 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 NANOS1Q8WY41 292 aaKnown RBP12.64□□□□□ -0.39
C9orf47-203ENST00000375851 CNOT9Q92600 299 aaKnown RBP12.64□□□□□ -0.39
C9orf47-203ENST00000375851 ITPKCQ96DU7 683 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 ANKRD19PQ9H560 264 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 DUSP22Q9NRW4 184 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 VSX1Q9NZR4 365 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-203ENST00000375851 MLXQ9UH92 298 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 UBQLN2Q9UHD9 624 aa12.64□□□□□ -0.39
C9orf47-203ENST00000375851 BORCS7-ASMTA0A0B4J1R7 106 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 METTL15A6NJ78 407 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 OR2T7P0C7T2 308 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 CD79AP11912 226 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 POU3F2P20265 443 aaPredicted RBP12.63□□□□□ -0.39
C9orf47-203ENST00000375851 AGTR1P30556 359 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 HSD17B7P56937 341 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 PLK5Q496M5 336 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 LRRC28Q86X40 367 aaPredicted RBP12.63□□□□□ -0.39
C9orf47-203ENST00000375851 OR2T27Q8NH04 317 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 RADILQ96JH8 1075 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 CENPOQ9BU64 300 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 UBQLN3Q9H347 655 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 GAREM1Q9H706 876 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 SLC22A7Q9Y694 548 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 PAPPA2Q9BXP8 1791 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 H3BUI4 141 aa12.63□□□□□ -0.39
C9orf47-203ENST00000375851 SOCS6O14544 535 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms