RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 TMEM249Q2WGJ8 235 aa20.4■□□□□ 0.86
C9orf47-202ENST00000375850 SAXO2Q658L1 398 aa20.4■□□□□ 0.86
C9orf47-202ENST00000375850 EMBQ6PCB8 327 aa20.4■□□□□ 0.86
C9orf47-202ENST00000375850 ADGRG3Q86Y34 549 aa20.4■□□□□ 0.86
C9orf47-202ENST00000375850 DDIT4LQ96D03 193 aa20.4■□□□□ 0.86
C9orf47-202ENST00000375850 NEURL3Q96EH8 262 aa20.4■□□□□ 0.86
C9orf47-202ENST00000375850 ARL5BQ96KC2 179 aa20.4■□□□□ 0.86
C9orf47-202ENST00000375850 NAA11Q9BSU3 229 aaPredicted RBP20.4■□□□□ 0.86
C9orf47-202ENST00000375850 LPAR3Q9UBY5 353 aa20.4■□□□□ 0.86
C9orf47-202ENST00000375850 SCN2BO60939 215 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 MYZAPP0CAP1 466 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 UQCRBP14927 111 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 CLNS1AP54105 237 aaKnown RBP20.39■□□□□ 0.85
C9orf47-202ENST00000375850 OR2B6P58173 313 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 GNA13Q14344 377 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 FRRS1Q6ZNA5 592 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 NUDCD3Q8IVD9 361 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 CLEC4FQ8N1N0 589 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 PROX1Q92786 737 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 UPB1Q9UBR1 384 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.39■□□□□ 0.85
C9orf47-202ENST00000375850 PMF1-BGLAPU3KQ54 211 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 CR1P17927 2039 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 MXRA5Q9NR99 2828 aa20.39■□□□□ 0.85
C9orf47-202ENST00000375850 M0R1B8 84 aa20.38■□□□□ 0.85
C9orf47-202ENST00000375850 PDLIM1O00151 329 aa20.38■□□□□ 0.85
C9orf47-202ENST00000375850 FAAHO00519 579 aa20.38■□□□□ 0.85
C9orf47-202ENST00000375850 PAX7P23759 505 aa20.38■□□□□ 0.85
C9orf47-202ENST00000375850 ETV4P43268 484 aa20.38■□□□□ 0.85
C9orf47-202ENST00000375850 POLR2HP52434 150 aaKnown RBP20.38■□□□□ 0.85
C9orf47-202ENST00000375850 TNFAIP8L2Q6P589 184 aaPredicted RBP20.38■□□□□ 0.85
C9orf47-202ENST00000375850 CASP12Q6UXS9 341 aa20.38■□□□□ 0.85
C9orf47-202ENST00000375850 FAM168AQ92567 244 aa20.38■□□□□ 0.85
C9orf47-202ENST00000375850 RAB8BQ92930 207 aa20.38■□□□□ 0.85
C9orf47-202ENST00000375850 PIF1Q9H611 641 aa20.38■□□□□ 0.85
C9orf47-202ENST00000375850 AKTIPQ9H8T0 292 aa20.38■□□□□ 0.85
C9orf47-202ENST00000375850 MARCOQ9UEW3 520 aaPredicted RBP20.38■□□□□ 0.85
C9orf47-202ENST00000375850 TYROBPO43914 113 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 SERPINE1P05121 402 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 ITGA5P08648 1049 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 PTNP21246 168 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 CHI3L1P36222 383 aaPredicted RBP20.37■□□□□ 0.85
C9orf47-202ENST00000375850 IDH2P48735 452 aaKnown RBP20.37■□□□□ 0.85
C9orf47-202ENST00000375850 EFNA4P52798 201 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 CASP8Q14790 479 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 GPAT3Q53EU6 434 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 OLIG3Q7RTU3 272 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 TRIML2Q8N7C3 387 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 TRNT1Q96Q11 434 aaKnown RBP20.37■□□□□ 0.85
C9orf47-202ENST00000375850 OR11A1Q9GZK7 315 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 FLVCR1Q9Y5Y0 555 aa20.37■□□□□ 0.85
C9orf47-202ENST00000375850 NUP214P35658 2090 aaPredicted RBP20.37■□□□□ 0.85
C9orf47-202ENST00000375850 ANK3Q12955 4377 aaKnown RBP20.37■□□□□ 0.85
C9orf47-202ENST00000375850 TMED7-TICAM2A0A0A6YYA0 188 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 GPRIN2O60269 458 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 CPSF4O95639 269 aaKnown RBP20.36■□□□□ 0.85
C9orf47-202ENST00000375850 WNT11O96014 354 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 APOBEC3AP31941 199 aaPredicted RBP20.36■□□□□ 0.85
C9orf47-202ENST00000375850 CASP9P55211 416 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 SPOCK1Q08629 439 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 LRRC74AQ0VAA2 488 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 FUT5Q11128 374 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 PDCD2Q16342 344 aaPredicted RBP20.36■□□□□ 0.85
C9orf47-202ENST00000375850 PAQR6Q6TCH4 344 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 CCDC103Q8IW40 242 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 PHC2Q8IXK0 858 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 TMEM45BQ96B21 275 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 SLC35A5Q9BS91 424 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 SLC17A5Q9NRA2 495 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 TMED7Q9Y3B3 224 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 RAP2CQ9Y3L5 183 aa20.36■□□□□ 0.85
C9orf47-202ENST00000375850 BIRC5O15392 142 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 BCAS1O75363 584 aaPredicted RBP20.35■□□□□ 0.85
C9orf47-202ENST00000375850 MPGP29372 298 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 NTF4P34130 210 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 THBS2P35442 1172 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 SLC1A3P43003 542 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 PRPS1P60891 318 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 CYB5R2Q6BCY4 276 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 KLHL24Q6TFL4 600 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 B3GLCTQ6Y288 498 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 ABHD12BQ7Z5M8 362 aaPredicted RBP20.35■□□□□ 0.85
C9orf47-202ENST00000375850 ANKRD46Q86W74 232 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 WDR31Q8NA23 367 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 OR52E4Q8NGH9 312 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 ZG16BQ96DA0 208 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 BOD1Q96IK1 185 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 CCDC115Q96NT0 180 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 KCNK17Q96T54 332 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 SF3B5Q9BWJ5 86 aaKnown RBP20.35■□□□□ 0.85
C9orf47-202ENST00000375850 BEX2Q9BXY8 128 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 OBP2BQ9NPH6 170 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 BTNL2Q9UIR0 455 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 OSGIN1Q9UJX0 560 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 ATP23Q9Y6H3 246 aa20.35■□□□□ 0.85
C9orf47-202ENST00000375850 AGAP5A6NIR3 686 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 E9PBE3 544 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 HMGN4O00479 90 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 ABCE1P61221 599 aaKnown RBP20.34■□□□□ 0.85
C9orf47-202ENST00000375850 PHC1P78364 1004 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms