RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 A0A0G2JND7 137 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 A0A0G2JPF8 293 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 HNRNPCL2B2RXH8 293 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 HNRNPCL3B7ZW38 293 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 HNRNPCL1O60812 293 aaKnown RBP13.82□□□□□ -0.2
SDHB-201ENST00000375499 PGM3O95394 542 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 RAF1P04049 648 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 THBS1P07996 1170 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 HNRNPCL4P0DMR1 293 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
SDHB-201ENST00000375499 PSMB1P20618 241 aaKnown RBP13.82□□□□□ -0.2
SDHB-201ENST00000375499 CSNK2A1P68400 391 aaPredicted RBP13.82□□□□□ -0.2
SDHB-201ENST00000375499 HOXC5Q00444 222 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 BNIP2Q12982 314 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 SELPLGQ14242 412 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 GNA13Q14344 377 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 GCNT6Q5T4J0 391 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 MTDHQ86UE4 582 aaKnown RBP13.82□□□□□ -0.2
SDHB-201ENST00000375499 PMM1Q92871 262 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 SPATA9Q9BWV2 254 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 BCL2L10Q9HD36 194 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 ZNF226Q9NYT6 803 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 HDGFL3Q9Y3E1 203 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 SPIN1Q9Y657 262 aaPredicted RBP13.82□□□□□ -0.2
SDHB-201ENST00000375499 GMEB1Q9Y692 573 aa13.82□□□□□ -0.2
SDHB-201ENST00000375499 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.81□□□□□ -0.2
SDHB-201ENST00000375499 A0A1W2PP18 115 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 ZNF724A8MTY0 619 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 KLF4O43474 513 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 INHBBP09529 407 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 CD53P19397 219 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 OR3A2P47893 321 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 OR2B6P58173 313 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 H3F3AP84243 136 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 ADRM1Q16186 407 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 DEFB113Q30KQ7 82 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 GLIPR1L2Q4G1C9 344 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 STK32CQ86UX6 486 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 ZNF440Q8IYI8 595 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 CADM2Q8N3J6 435 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 BBS10Q8TAM1 723 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 S100PBPQ96BU1 408 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 RAD21L1Q9H4I0 556 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 TMEM45AQ9NWC5 275 aa13.81□□□□□ -0.2
SDHB-201ENST00000375499 THUMPD1Q9NXG2 353 aaKnown RBP13.81□□□□□ -0.2
SDHB-201ENST00000375499 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.81□□□□□ -0.2
SDHB-201ENST00000375499 DSCAMO60469 2012 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 JMJD1CQ15652 2540 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 IGKV3D-15A0A087WSY6 115 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 ZNF208O43345 1280 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 TPST1O60507 370 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 PLAUP00749 431 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 ADAP00813 363 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 GPX2P18283 190 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 ADSLP30566 484 aaPredicted RBP13.8□□□□□ -0.2
SDHB-201ENST00000375499 HOXC12P31275 282 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 HTR3AP46098 478 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 KEAP1Q14145 624 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 LARS2Q15031 903 aaKnown RBP13.8□□□□□ -0.2
SDHB-201ENST00000375499 ZNF311Q5JNZ3 666 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 SFRP5Q5T4F7 317 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 PRAMEF8Q5VWM4 474 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 PRAMEF7Q5VXH5 474 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 SHEQ5VZ18 495 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 SEZ6L2Q6UXD5 910 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 DHDDSQ86SQ9 333 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 ATG4DQ86TL0 474 aaPredicted RBP13.8□□□□□ -0.2
SDHB-201ENST00000375499 WFDC8Q8IUA0 241 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 SPATA3Q8NHX4 192 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 C3orf49Q96BT1 292 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 WFDC6Q9BQY6 131 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 TMEM120AQ9BXJ8 343 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 FGFR1OP2Q9NVK5 253 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 TMEM181Q9P2C4 612 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 GPR52Q9Y2T5 361 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 DNHD1Q96M86 4753 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 CADP27708 2225 aa13.8□□□□□ -0.2
SDHB-201ENST00000375499 TMEM247A6NEH6 219 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 LYZL6O75951 148 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 IGHV3-9P01782 118 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 ETS2P15036 469 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 FPR1P21462 350 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 IGHV1-2P23083 117 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 HTR2AP28223 471 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 AQP1P29972 269 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 CLK1P49759 484 aaKnown RBP13.79□□□□□ -0.2
SDHB-201ENST00000375499 FOXG1P55316 489 aaPredicted RBP13.79□□□□□ -0.2
SDHB-201ENST00000375499 MTPNP58546 118 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
SDHB-201ENST00000375499 CDK6Q00534 326 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 WBP2NLQ6ICG8 309 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 GALNT5Q7Z7M9 940 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 PTOV1Q86YD1 416 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 KRTAP1-3Q8IUG1 177 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 DPP10Q8N608 796 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 DDIT4LQ96D03 193 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 TACO1Q9BSH4 297 aaKnown RBP13.79□□□□□ -0.2
SDHB-201ENST00000375499 TMEM38AQ9H6F2 299 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 LEF1Q9UJU2 399 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms