RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 NDUFB11Q9NX14 153 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 NUFIP1Q9UHK0 495 aaKnown RBP7.58□□□□□ -1.2
UBR4-202ENST00000375224 CLEC2DQ9UHP7 191 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 KCNE5Q9UJ90 142 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 ZNF223Q9UK11 482 aaPredicted RBP7.58□□□□□ -1.2
UBR4-202ENST00000375224 SZT2Q5T011 3432 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 PRSS47A8MTI9 375 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 HRO43593 1189 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 CHP2O43745 196 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 LDOC1O95751 146 aaPredicted RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 ADRA2AP08913 450 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 GKN3PP0CG01 181 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 HTR2AP28223 471 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 ARL4DP49703 201 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 PSG6Q00889 435 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 ZNF45Q02386 682 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 DSG2Q14126 1118 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 ZNF169Q14929 603 aaPredicted RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 ZNF141Q15928 474 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 SSX1Q16384 188 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 C5orf46Q6UWT4 87 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 BCDIN3DQ7Z5W3 292 aaKnown RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 BMP8AQ7Z5Y6 402 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 MVB12AQ96EY5 273 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 ART5Q96L15 291 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 HSPA12BQ96MM6 686 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 CLEC4MQ9H2X3 399 aaPredicted RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 EXOSC4Q9NPD3 245 aaKnown RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 UFSP2Q9NUQ7 469 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 SIDT1Q9NXL6 827 aaKnown RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 MMACHCQ9Y4U1 282 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 NPIPA5A0A0B4J1W7 369 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 CENPVL1A0A0U1RR11 272 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 A0A1W2PPC1 479 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 LINC00862A6NCI5 91 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 FAM86C2PA6NEL3 165 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 NPIPA7E9PJI5 369 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 STK25O00506 426 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 PIP5K1CO60331 668 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 PLATP00750 562 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 TSPAN19P0C672 248 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 NPIPA8P0DM63 369 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 CPEP16870 476 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 HTR1FP30939 366 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 NUP62P37198 522 aaPredicted RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 GCGRP47871 477 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 FNTBP49356 437 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 CTBP2P56545 445 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 FUT7Q11130 342 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 RIN1Q13671 783 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 ZNF273Q14593 569 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 DEFB133Q30KQ1 61 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 AADACL4Q5VUY2 407 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 SLC30A6Q6NXT4 461 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 MAMDC2Q7Z304 686 aaPredicted RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 LAPTM4BQ86VI4 370 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 MEX3DQ86XN8 651 aaKnown RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 ZNF440Q8IYI8 595 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 ZNF680Q8NEM1 530 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 OR4Q3Q8NH05 313 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 OR51Q1Q8NH59 317 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 TMCO6Q96DC7 493 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 SAMD8Q96LT4 415 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 HDHD5Q9BXW7 423 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 FOXQ1Q9C009 403 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 CAPN10Q9HC96 672 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 CACNA1IQ9P0X4 2223 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 REV3LO60673 3130 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 MEIOCA2RUB1 952 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 HCN1O60741 890 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 PIAS2O75928 621 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 HTR3BO95264 441 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 FCER2P06734 321 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 CTSBP07858 339 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 PRG2P13727 222 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 TGFBR1P36897 503 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 ATP12AP54707 1039 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 ACY1Q03154 408 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 AANATQ16613 207 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 PDZK1Q5T2W1 519 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 SLC6A19Q695T7 634 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 DBX2Q6ZNG2 339 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 DGAT2L6Q6ZPD8 337 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 MED25Q71SY5 747 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 PLXDC1Q8IUK5 500 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 ZNF614Q8N883 585 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 FAM83FQ8NEG4 500 aaPredicted RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 NANPQ8TBE9 248 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 RBCK1Q9BYM8 510 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 OR52D1Q9H346 318 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 UBQLN3Q9H347 655 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 ENAMQ9NRM1 1142 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 RPS6KB2Q9UBS0 482 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 EXOGQ9Y2C4 368 aaKnown RBP7.57□□□□□ -1.2
UBR4-202ENST00000375224 OR10H1Q9Y4A9 318 aa7.57□□□□□ -1.2
UBR4-202ENST00000375224 THADAQ6YHU6 1953 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 A0A075B6Q4 140 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 A0A0B4J2E0 115 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 IGHV5-51A0A0C4DH38 117 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 A0A1B0GX12 115 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms