RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 XAGE5Q8WWM1 108 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 OIT3Q8WWZ8 545 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 PROX1Q92786 737 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 RAB8BQ92930 207 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 SAP130Q9H0E3 1048 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 SHARPINQ9H0F6 387 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 SLC17A5Q9NRA2 495 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 POLE3Q9NRF9 147 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 SLC7A10Q9NS82 523 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 ASIC5Q9NY37 505 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 LPAR3Q9UBY5 353 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 DCTN4Q9UJW0 460 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 TRAPPC4Q9Y296 219 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 WDR45Q9Y484 360 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 ATP23Q9Y6H3 246 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 TLDC2A0PJX2 215 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 ATP6V1G2-DDX39BF2Z307 99 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 SCN2BO60939 215 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 SPAG7O75391 227 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 CSF3P09919 207 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 CCNA2P20248 432 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 FKBP2P26885 142 aaKnown RBP12.07□□□□□ -0.48
CXCL12-202ENST00000374426 MAGEA8P43361 318 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 OR2B6P58173 313 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 KCNJ10P78508 379 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 ATAD3BQ5T9A4 648 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 TSPO2Q5TGU0 170 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 C17orf78Q8N4C9 275 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 C1orf162Q8NEQ5 155 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-202ENST00000374426 OR8J2Q8NGG1 315 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 OR4A15Q8NGL6 344 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 TCP10LQ8TDR4 215 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 ROPN1LQ96C74 230 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 FKRPQ9H9S5 495 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 EXOSC3Q9NQT5 275 aaKnown RBP12.07□□□□□ -0.48
CXCL12-202ENST00000374426 NOP53Q9NZM5 478 aaKnown RBP12.07□□□□□ -0.48
CXCL12-202ENST00000374426 TMEM181Q9P2C4 612 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 FLVCR1Q9Y5Y0 555 aa12.07□□□□□ -0.48
CXCL12-202ENST00000374426 PRAMEF27A3QJZ7 478 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 VWC2LB2RUY7 222 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 LMX1BO60663 402 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 AGR2O95994 175 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 IMPDH2P12268 514 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 BMP4P12644 408 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 IGFBP5P24593 272 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 APOBEC3AP31941 199 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-202ENST00000374426 THBS2P35442 1172 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 IDH2P48735 452 aaKnown RBP12.06□□□□□ -0.48
CXCL12-202ENST00000374426 PHC1P78364 1004 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 LSM11P83369 360 aaKnown RBP eCLIP12.06□□□□□ -0.48
CXCL12-202ENST00000374426 CHRNB3Q05901 458 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 MAD2L1Q13257 205 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-202ENST00000374426 SLC17A1Q14916 467 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 SWI5Q1ZZU3 235 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 MST1LQ2TV78 715 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 SAXO2Q658L1 398 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 ANKRD46Q86W74 232 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 ARFGAP2Q8N6H7 521 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 CNOT9Q92600 299 aaKnown RBP12.06□□□□□ -0.48
CXCL12-202ENST00000374426 PARPBPQ9NWS1 579 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 UPB1Q9UBR1 384 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 PCDHGB4Q9UN71 923 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 SLC9A8Q9Y2E8 581 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 AMDHD2Q9Y303 409 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 PMF1-BGLAPU3KQ54 211 aa12.06□□□□□ -0.48
CXCL12-202ENST00000374426 TMED7-TICAM2A0A0A6YYA0 188 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 PRSS51A0A1B0GVH4 220 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 TMEM72A0PK05 275 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 SLC35F4A4IF30 521 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 AP3D1O14617 1153 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 EIF1BO60739 113 aaKnown RBP12.05□□□□□ -0.48
CXCL12-202ENST00000374426 C1QCP02747 245 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 BPGMP07738 259 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 UQCRC2P22695 453 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 HTR3AP46098 478 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 GZMKP49863 264 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 SLC35A1P78382 337 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 SRSF2Q01130 221 aaKnown RBP12.05□□□□□ -0.48
CXCL12-202ENST00000374426 TGFBR3Q03167 851 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 SMU1Q2TAY7 513 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 IL17RELQ6ZVW7 336 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 NEURL3Q96EH8 262 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 SORCS2Q96PQ0 1159 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 C19orf24Q9BVV8 132 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 PRR14Q9BWN1 585 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.05□□□□□ -0.48
CXCL12-202ENST00000374426 OSGIN1Q9UJX0 560 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 MOKQ9UQ07 419 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 TMED7Q9Y3B3 224 aa12.05□□□□□ -0.48
CXCL12-202ENST00000374426 ZC3H12DA2A288 527 aaKnown RBP12.04□□□□□ -0.48
CXCL12-202ENST00000374426 ZNF208O43345 1280 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 CPSF4O95639 269 aaKnown RBP12.04□□□□□ -0.48
CXCL12-202ENST00000374426 CREB1P16220 341 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 SRD5A1P18405 259 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 TACR3P29371 465 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 MPGP29372 298 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 NR4A2P43354 598 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 KHKP50053 298 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 POLR2HP52434 150 aaKnown RBP12.04□□□□□ -0.48
CXCL12-202ENST00000374426 PRPS1P60891 318 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms