RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 RNF4P78317 190 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 ACSM1Q08AH1 577 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 OVCH1Q7RTY7 1134 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 APCDD1LQ8NCL9 501 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 OR52E2Q8NGJ4 325 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 ZNF563Q8TA94 476 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 CEP76Q8TAP6 659 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 SEMA4CQ9C0C4 833 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 ADAM18Q9Y3Q7 739 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 NDUFB5O43674 189 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 ALOX12BO75342 701 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 ONECUT2O95948 504 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 IGF2P01344 180 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 GYPBP06028 91 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 ZNF12P17014 697 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 SLC6A8P48029 635 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 EGR4Q05215 589 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 PPP1R3BQ86XI6 285 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 TMEM105Q8N8V8 129 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 OR4K13Q8NH42 304 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 GFM1Q96RP9 751 aaKnown RBP17.87■□□□□ 0.45
HDAC1-201ENST00000373548 TBX5Q99593 518 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 TIMP4Q99727 224 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 TBL1XR1Q9BZK7 514 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 ADAM19Q9H013 955 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 CAB39Q9Y376 341 aaPredicted RBP17.87■□□□□ 0.45
HDAC1-201ENST00000373548 EXPH5Q8NEV8 1989 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 HTR3EA5X5Y0 456 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 SAGE2PA6NJ88 616 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 VSTM2BA6NLU5 285 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 AKAP8O43823 692 aaKnown RBP17.87■□□□□ 0.45
HDAC1-201ENST00000373548 GMFGO60234 142 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 TACR3P29371 465 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 GABRA5P31644 462 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 RPL4P36578 427 aaKnown RBP17.87■□□□□ 0.45
HDAC1-201ENST00000373548 ZNF74Q16587 644 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 LCN10Q6JVE6 187 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 DPY19L2P2Q6ZN68 376 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 FAM98AQ8NCA5 519 aaKnown RBP17.87■□□□□ 0.45
HDAC1-201ENST00000373548 SDR9C7Q8NEX9 313 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 MOGAT1Q96PD6 335 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 TM9SF2Q99805 663 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 BARHL1Q9BZE3 327 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 ISG20L2Q9H9L3 353 aaKnown RBP17.87■□□□□ 0.45
HDAC1-201ENST00000373548 ADGRL4Q9HBW9 690 aa17.87■□□□□ 0.45
HDAC1-201ENST00000373548 MAGEB3O15480 346 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 FADS1O60427 444 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 SULT1C4O75897 302 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 MRPL3P09001 348 aaKnown RBP17.86■□□□□ 0.45
HDAC1-201ENST00000373548 IFITM3Q01628 133 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 TOMM34Q15785 309 aaPredicted RBP17.86■□□□□ 0.45
HDAC1-201ENST00000373548 C22orf42Q6IC83 251 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 SLC23A3Q6PIS1 610 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 C16orf47Q6ZP98 133 aaPredicted RBP17.86■□□□□ 0.45
HDAC1-201ENST00000373548 SNX29P2Q8IUI4 249 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 MOSPD2Q8NHP6 518 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 LIPHQ8WWY8 451 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 C1GALT1C1Q96EU7 318 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 LRFN5Q96NI6 719 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 DEPDC7Q96QD5 511 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 ALG8Q9BVK2 526 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 RERGLQ9H628 205 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 SIAEQ9HAT2 523 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 NRIP3Q9NQ35 241 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 HAO2Q9NYQ3 351 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 KLHL21Q9UJP4 597 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 D6RAR5 112 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 SLC30A4O14863 429 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 EIF4E2O60573 245 aaKnown RBP17.86■□□□□ 0.45
HDAC1-201ENST00000373548 SBK2P0C263 348 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 EMP2P54851 167 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 CD200R1LQ6Q8B3 271 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 KLBQ86Z14 1044 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 OR10H4Q8NGA5 316 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 TP53INP1Q96A56 240 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 CTRCQ99895 268 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 GTPBP2Q9BX10 602 aaKnown RBP17.86■□□□□ 0.45
HDAC1-201ENST00000373548 NUAK2Q9H093 628 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 C12orf10Q9HB07 376 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 MMP25Q9NPA2 562 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 SNTG1Q9NSN8 517 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 QPCTLQ9NXS2 382 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 PEX16Q9Y5Y5 336 aa17.86■□□□□ 0.45
HDAC1-201ENST00000373548 DAPL1A0PJW8 107 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 KHNYNO15037 678 aaKnown RBP17.85■□□□□ 0.45
HDAC1-201ENST00000373548 ARPC3O15145 178 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 SCO2O43819 266 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 GDF9O60383 454 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 ITPKBP27987 946 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 S100A5P33763 92 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 EVI2BP34910 448 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 GRK6P43250 576 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 PPP5CP53041 499 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 PRPS1P60891 318 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 FABP5Q01469 135 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 LTBQ06643 244 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 CRTC2Q53ET0 693 aaPredicted RBP17.85■□□□□ 0.45
HDAC1-201ENST00000373548 TMPRSS11AQ6ZMR5 421 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 C10orf53Q8N6V4 93 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 METTL21AQ8WXB1 218 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms