RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 HBMQ6B0K9 141 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 FNDC8Q8TC99 324 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 ZNF587Q96SQ5 575 aaPredicted RBP13.67□□□□□ -0.22
NDC1-201ENST00000371429 PLEKHJ1Q9NW61 149 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 TMA7Q9Y2S6 64 aaKnown RBP13.67□□□□□ -0.22
NDC1-201ENST00000371429 FAM166BA8MTA8 275 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 UQCRC1P31930 480 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 MAP2K3P46734 347 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 PLCXD3Q63HM9 321 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 TMEM163Q8TC26 289 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 PIGCQ92535 297 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 SYT3Q9BQG1 590 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 ANKRD60Q9BZ19 345 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 TCRBV3S1A0A5B6 114 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 C2orf72A6NCS6 295 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 ZNF44P15621 663 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 HTR4Q13639 388 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 PLGLAQ15195 96 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 NKPD1Q17RQ9 610 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 BPHLQ86WA6 291 aaPredicted RBP13.67□□□□□ -0.22
NDC1-201ENST00000371429 OR52A5Q9H2C5 316 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 ELOVL3Q9HB03 270 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 COQ3Q9NZJ6 369 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 MRPL15Q9P015 296 aaKnown RBP13.67□□□□□ -0.22
NDC1-201ENST00000371429 NPFFR2Q9Y5X5 522 aa13.67□□□□□ -0.22
NDC1-201ENST00000371429 ATG12O94817 140 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 PRSS3P35030 304 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 NCS1P62166 190 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 IL17RDQ8NFM7 739 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 SCGB1C1Q8TD33 95 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 ZNF583Q96ND8 569 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 TNFRSF13CQ96RJ3 184 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 AMY2AP04746 511 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 GFERP55789 205 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 Q7L0L9 218 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 NLRP8Q86W28 1048 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 GRPEL2Q8TAA5 225 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 C4orf36Q96KX1 117 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 MICU1Q9BPX6 476 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 PCED1AQ9H1Q7 454 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 RLIMQ9NVW2 624 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 TRBV4-1A0A0J9YWV2 114 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 MPPED1O15442 326 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 PRKAR1BP31321 381 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 RBM39Q14498 530 aaKnown RBP13.66□□□□□ -0.22
NDC1-201ENST00000371429 LEXMQ3ZCV2 418 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 ASB17Q8WXJ9 295 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 CDX2Q99626 313 aaPredicted RBP13.66□□□□□ -0.22
NDC1-201ENST00000371429 EGLN3Q9H6Z9 239 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 SYNPO2LQ9H987 977 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 SMCO3A2RU48 225 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 SYT5O00445 386 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 FOXD2O60548 495 aaPredicted RBP13.66□□□□□ -0.22
NDC1-201ENST00000371429 ADARB1P78563 741 aaKnown RBP13.66□□□□□ -0.22
NDC1-201ENST00000371429 OR6Q1Q8NGQ2 317 aa13.66□□□□□ -0.22
NDC1-201ENST00000371429 YES1P07947 543 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 MTHFD2P13995 350 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 ATP1B3P54709 279 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 BIDP55957 195 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 ACSM3Q53FZ2 586 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 TRMT12Q53H54 448 aaKnown RBP13.65□□□□□ -0.22
NDC1-201ENST00000371429 ZNF585AQ6P3V2 769 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 ISL2Q96A47 359 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 TXNDC15Q96J42 360 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 PHOX2BQ99453 314 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 PAPOLGQ9BWT3 736 aaKnown RBP13.65□□□□□ -0.22
NDC1-201ENST00000371429 TEX101Q9BY14 249 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 PLA2G2FQ9BZM2 168 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 RHBDD3Q9Y3P4 386 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 ST14Q9Y5Y6 855 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 LOC105369274A0A096LPK9 316 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 H7C1C5 153 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 IFNA7P01567 189 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 EPHA5P54756 1037 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 GPR85P60893 370 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 LCN6P62502 163 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 SLC36A2Q495M3 483 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 COX20Q5RI15 118 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 TMEM71Q6P5X7 295 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 FAM57BQ71RH2 274 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 OR4N4Q8N0Y3 316 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 PIAS4Q8N2W9 510 aaPredicted RBP13.65□□□□□ -0.22
NDC1-201ENST00000371429 C8orf44Q96CB5 159 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 USB1Q9BQ65 265 aaKnown RBP13.65□□□□□ -0.22
NDC1-201ENST00000371429 MENTQ9BUN1 341 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 SLC25A18Q9H1K4 315 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 A8MVM7 634 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 AKR1C4P17516 323 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 LCN1P31025 176 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 FOXC1Q12948 553 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 SLC22A6Q4U2R8 563 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 GDPGP1Q6ZNW5 385 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 MOB3CQ70IA8 216 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 TOMM40LQ969M1 308 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 C1orf198Q9H425 327 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 ZNF226Q9NYT6 803 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 SNX11Q9Y5W9 270 aa13.65□□□□□ -0.22
NDC1-201ENST00000371429 KRBA1A5PL33 1030 aa13.65□□□□□ -0.23
NDC1-201ENST00000371429 MPLP40238 635 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms