RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 TMEM233B4DJY2 109 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 LYNX1G3V0Z9 82 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 RIPK2O43353 540 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 FAM153BP0C7A2 387 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 LYNX1P0DP58 116 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 IMPDH2P12268 514 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 DAOP14920 347 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 PGCP20142 388 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 MPGP29372 298 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 PGM1P36871 562 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 HPCAL1P37235 193 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 MAGEA8P43361 318 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 COMPP49747 757 aaPredicted RBP13.36□□□□□ -0.27
SSR4-204ENST00000370087 PPOXP50336 477 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 IDH3GP51553 393 aaPredicted RBP13.36□□□□□ -0.27
SSR4-204ENST00000370087 ACTG1P63261 375 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 TUBA1BP68363 451 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 TUBA4AP68366 448 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 EFNB3Q15768 340 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 FAM153CQ494X1 144 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 ATP6AP1LQ52LC2 224 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 EMBQ6PCB8 327 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 TUBA1AQ71U36 451 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 MYPOPQ86VE0 399 aaPredicted RBP13.36□□□□□ -0.27
SSR4-204ENST00000370087 ADGRG3Q86Y34 549 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 SFXN5Q8TD22 340 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 UBLCP1Q8WVY7 318 aaPredicted RBP13.36□□□□□ -0.27
SSR4-204ENST00000370087 TMEM234Q8WY98 164 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 OR5P2Q8WZ92 322 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 HPS1Q92902 700 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 SLC38A2Q96QD8 506 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 SLC9A8Q9Y2E8 581 aa13.36□□□□□ -0.27
SSR4-204ENST00000370087 B9A039 149 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 H3BQF6 201 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 AZIN1O14977 448 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 DNPH1O43598 174 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 KRT16P08779 473 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 RYKP34925 604 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 APOBEC1P41238 236 aaKnown RBP13.35□□□□□ -0.27
SSR4-204ENST00000370087 DVL1P1P54792 670 aaPredicted RBP13.35□□□□□ -0.27
SSR4-204ENST00000370087 DNAJB13P59910 316 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 PTGR1Q14914 329 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 SLC17A1Q14916 467 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 CFAP157Q5JU67 520 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 KANK2Q63ZY3 851 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 RNF165Q6ZSG1 346 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 R3HCC1LQ7Z5L2 792 aaKnown RBP13.35□□□□□ -0.27
SSR4-204ENST00000370087 GSPT2Q8IYD1 628 aaKnown RBP13.35□□□□□ -0.27
SSR4-204ENST00000370087 KRTCAP2Q8N6L1 136 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 ZIC4Q8N9L1 334 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 ACMSDQ8TDX5 336 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 CCDC126Q96EE4 140 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 ZNF385AQ96PM9 386 aaKnown RBP13.35□□□□□ -0.27
SSR4-204ENST00000370087 ZNF350Q9GZX5 532 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 PPCSQ9HAB8 311 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 METRNQ9UJH8 293 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 HDGFL3Q9Y3E1 203 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 DNAJC15Q9Y5T4 150 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 CMYA5Q8N3K9 4069 aa13.35□□□□□ -0.27
SSR4-204ENST00000370087 ZC3H12DA2A288 527 aaKnown RBP13.34□□□□□ -0.27
SSR4-204ENST00000370087 CLDN24A6NM45 220 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 NR5A2O00482 541 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 AP3D1O14617 1153 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 SKAP2O75563 359 aaPredicted RBP13.34□□□□□ -0.27
SSR4-204ENST00000370087 PDE5AO76074 875 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 WNT11O96014 354 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 CECR9P0C854 216 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 NEFHP12036 1026 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 DDX5P17844 614 aaKnown RBP13.34□□□□□ -0.27
SSR4-204ENST00000370087 SOAT1P35610 550 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 VSNL1P62760 191 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 HBA1P69905 142 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 NAAAQ02083 359 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 HGFACQ04756 655 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 FUT5Q11128 374 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 RIN1Q13671 783 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 TBRG1Q3YBR2 411 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 KLHL24Q6TFL4 600 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 EIF3MQ7L2H7 374 aaKnown RBP13.34□□□□□ -0.27
SSR4-204ENST00000370087 LINGO2Q7L985 606 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 GRINAQ7Z429 371 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 SVOPLQ8N434 492 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 C3orf56Q8N813 242 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 ZNF563Q8TA94 476 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 ZFAND2BQ8WV99 257 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 KATNB1Q9BVA0 655 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 TXLNGYQ9BZA5 131 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 OXSMQ9NWU1 459 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 TMEM181Q9P2C4 612 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.34□□□□□ -0.27
SSR4-204ENST00000370087 TBK1Q9UHD2 729 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 TMED5Q9Y3A6 229 aa13.34□□□□□ -0.27
SSR4-204ENST00000370087 SPIN1Q9Y657 262 aaPredicted RBP13.34□□□□□ -0.27
SSR4-204ENST00000370087 V9GYY5 206 aaPredicted RBP13.34□□□□□ -0.27
SSR4-204ENST00000370087 TMEM129A0AVI4 362 aa13.33□□□□□ -0.28
SSR4-204ENST00000370087 TMEM72A0PK05 275 aa13.33□□□□□ -0.28
SSR4-204ENST00000370087 TMEM89A2RUT3 159 aa13.33□□□□□ -0.28
SSR4-204ENST00000370087 hCG_2039718K7EN88 272 aa13.33□□□□□ -0.28
SSR4-204ENST00000370087 PLIN3O60664 434 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms