RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 BST1Q10588 318 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 FAPQ12884 760 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 TNFAIP8L3Q5GJ75 292 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 ZNF621Q6ZSS3 439 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.09□□□□□ -0.31
CTSD-202ENST00000367196 DTX2Q86UW9 622 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 ARL5BQ96KC2 179 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 TRAF4Q9BUZ4 470 aaPredicted RBP13.09□□□□□ -0.31
CTSD-202ENST00000367196 PNPOQ9NVS9 261 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 THAP1Q9NVV9 213 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 P2RX2Q9UBL9 471 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 POU2F3Q9UKI9 436 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 TMED7Q9Y3B3 224 aa13.09□□□□□ -0.31
CTSD-202ENST00000367196 TMEM247A6NEH6 219 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 CFAP73A6NFT4 308 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 INAFM1C9JVW0 142 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 RFXANKO14593 260 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 HDAC3O15379 428 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 IL6P05231 212 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 IDO1P14902 403 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 CDKN1AP38936 164 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 NME5P56597 212 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 UFM1P61960 85 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 TGFBR3Q03167 851 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 SYPL1Q16563 259 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 GSTA3Q16772 222 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 ZSWIM7Q19AV6 140 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 PGGHGQ32M88 737 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 LIN52Q52LA3 116 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 ATG16L1Q676U5 607 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 SLC22A25Q6T423 547 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 CASP12Q6UXS9 341 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 ADGRG3Q86Y34 549 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
CTSD-202ENST00000367196 C17orf78Q8N4C9 275 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 C1orf162Q8NEQ5 155 aaPredicted RBP13.08□□□□□ -0.32
CTSD-202ENST00000367196 NEUROG1Q92886 237 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 ADAD1Q96M93 576 aaKnown RBP13.08□□□□□ -0.32
CTSD-202ENST00000367196 OR11A1Q9GZK7 315 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 SLC38A1Q9H2H9 487 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 SLCO5A1Q9H2Y9 848 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 ARMC7Q9H6L4 198 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 THUMPD1Q9NXG2 353 aaKnown RBP13.08□□□□□ -0.32
CTSD-202ENST00000367196 UPB1Q9UBR1 384 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 DCTN4Q9UJW0 460 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 RAB21Q9UL25 225 aa13.08□□□□□ -0.32
CTSD-202ENST00000367196 PLCE1Q9P212 2302 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 FAM234BA2RU67 622 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 PRAMEF27A3QJZ7 478 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 SHISA9B4DS77 424 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 RNF223E7ERA6 249 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 SDHDO14521 159 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 BCAS1O75363 584 aaPredicted RBP13.07□□□□□ -0.32
CTSD-202ENST00000367196 ANP32DO95626 131 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 IGHV3-9P01782 118 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 CHRM4P08173 479 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 ALDOCP09972 364 aaKnown RBP13.07□□□□□ -0.32
CTSD-202ENST00000367196 CCNA2P20248 432 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 RPS4Y1P22090 263 aaKnown RBP13.07□□□□□ -0.32
CTSD-202ENST00000367196 EDNRAP25101 427 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 COPZ1P61923 177 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 MRPL2Q5T653 305 aaKnown RBP13.07□□□□□ -0.32
CTSD-202ENST00000367196 PAQR6Q6TCH4 344 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 HMGN2P46Q86SG4 172 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 ATG4DQ86TL0 474 aaPredicted RBP13.07□□□□□ -0.32
CTSD-202ENST00000367196 ANKFN1Q8N957 763 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 ANKRD42Q8N9B4 389 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 OR52N5Q8NH56 324 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 CNOT9Q92600 299 aaKnown RBP13.07□□□□□ -0.32
CTSD-202ENST00000367196 ZG16BQ96DA0 208 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 TEX37Q96LM6 180 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 REG4Q9BYZ8 158 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 RMND5AQ9H871 391 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 NPAP1Q9NZP6 1156 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 OSGIN1Q9UJX0 560 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 AMDHD2Q9Y303 409 aa13.07□□□□□ -0.32
CTSD-202ENST00000367196 ZANQ9Y493 2812 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 CLDN24A6NM45 220 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 AP3D1O14617 1153 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 RAMP1O60894 148 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 GPIP06744 558 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 BMP4P12644 408 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 CXCR1P25024 350 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 EPHA3P29320 983 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 TACR3P29371 465 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 ACVR1BP36896 505 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 CRISP3P54108 245 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 H3F3AP84243 136 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 EPS8Q12929 822 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 PDCD4Q53EL6 469 aaKnown RBP13.06□□□□□ -0.32
CTSD-202ENST00000367196 NXNQ6DKJ4 435 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 KLHL24Q6TFL4 600 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 MSANTD1Q6ZTZ1 278 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 ABHD12BQ7Z5M8 362 aaPredicted RBP13.06□□□□□ -0.32
CTSD-202ENST00000367196 FBXL14Q8N1E6 418 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 PNPT1Q8TCS8 783 aaKnown RBP13.06□□□□□ -0.32
CTSD-202ENST00000367196 MUS81Q96NY9 551 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 DHRS9Q9BPW9 319 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 PIF1Q9H611 641 aa13.06□□□□□ -0.32
CTSD-202ENST00000367196 CBLN4Q9NTU7 201 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms