RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 NMRAL1Q9HBL8 299 aa3.68□□□□□ -1.82
RPL39-201ENST00000361575 CSDC2Q9Y534 153 aaKnown RBP3.68□□□□□ -1.82
RPL39-201ENST00000361575 PHF3Q92576 2039 aaKnown RBP3.67□□□□□ -1.82
RPL39-201ENST00000361575 IGHV1OR15-1A0A075B7D0 117 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 TCRBV9S1A1TA0A576 114 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 DHRS7CA6NNS2 312 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 E7ESA3 106 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 K7N7A8 449 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 DCTN6O00399 190 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 ABCD4O14678 606 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 STAMBPO95630 424 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 RBMY1CP0DJD4 496 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 CCDC130P13994 396 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 AQP1P29972 269 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 YWHABP31946 246 aaKnown RBP3.67□□□□□ -1.82
RPL39-201ENST00000361575 ATP5OP48047 213 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 RPL34P49207 117 aaKnown RBP3.67□□□□□ -1.82
RPL39-201ENST00000361575 TGM3Q08188 693 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 BST2Q10589 180 aaKnown RBP3.67□□□□□ -1.82
RPL39-201ENST00000361575 PLD1Q13393 1074 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 AANATQ16613 207 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 IMMTQ16891 758 aaKnown RBP3.67□□□□□ -1.82
RPL39-201ENST00000361575 OR2B11Q5JQS5 317 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 PGAP1Q75T13 922 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 ZNF677Q86XU0 584 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 TGIF2LXQ8IUE1 241 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 TCTEX1D2Q8WW35 142 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 RAPGEF5Q92565 580 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.67□□□□□ -1.82
RPL39-201ENST00000361575 NAF1Q96HR8 494 aaKnown RBP3.67□□□□□ -1.82
RPL39-201ENST00000361575 SIGLEC12Q96PQ1 595 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 PANX2Q96RD6 677 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 C19orf24Q9BVV8 132 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 NARFLQ9H6Q4 476 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 NANSQ9NR45 359 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 HOXC10Q9NYD6 342 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 CLSPNQ9HAW4 1339 aa3.67□□□□□ -1.82
RPL39-201ENST00000361575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.66□□□□□ -1.82
RPL39-201ENST00000361575 IGLV8-61A0A075B6I0 122 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 SMIM28A0A1B0GU29 152 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 LALBAP00709 142 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 HOXD10P28358 340 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 HTR1FP30939 366 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 EPS15P42566 896 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 PRRX1P54821 245 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 PLP1P60201 277 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 EGFEM1PQ0D2K5 195 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 NSUN5P1Q3KNT7 163 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 HIGD2BQ4VC39 106 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 LRRC66Q68CR7 880 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 RNASEKQ6P5S7 137 aaKnown RBP3.66□□□□□ -1.82
RPL39-201ENST00000361575 GTSCR1Q86UQ5 136 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 PSTKQ8IV42 348 aaKnown RBP3.66□□□□□ -1.82
RPL39-201ENST00000361575 MTURNQ8N3F0 131 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 ZNF485Q8NCK3 441 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 OR13F1Q8NGS4 319 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 OR2L2Q8NH16 312 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 SETD7Q8WTS6 366 aaKnown RBP3.66□□□□□ -1.82
RPL39-201ENST00000361575 FAM222BQ8WU58 562 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 HTR3CQ8WXA8 447 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 CHCHD10Q8WYQ3 142 aaPredicted RBP3.66□□□□□ -1.82
RPL39-201ENST00000361575 UFD1Q92890 307 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 SLC25A38Q96DW6 304 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 FOXN4Q96NZ1 517 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 CLCC1Q96S66 551 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 PLIN2Q99541 437 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 PAXXQ9BUH6 204 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 SLITRK2Q9H156 845 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 PPA2Q9H2U2 334 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 REEP4Q9H6H4 257 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 NHEJ1Q9H9Q4 299 aaPredicted RBP3.66□□□□□ -1.82
RPL39-201ENST00000361575 NT5MQ9NPB1 228 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 STAP1Q9ULZ2 295 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 UBQLN1Q9UMX0 589 aaKnown RBP3.66□□□□□ -1.82
RPL39-201ENST00000361575 CA5BQ9Y2D0 317 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 PLLPQ9Y342 182 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 TMED5Q9Y3A6 229 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 PEX16Q9Y5Y5 336 aa3.66□□□□□ -1.82
RPL39-201ENST00000361575 HEATR9A2RTY3 570 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 TUBAL3A6NHL2 446 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 BCL2L11O43521 198 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 C1orf105O95561 183 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 THY1P04216 161 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 OR8U8P0C7N1 319 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 RNH1P13489 461 aaKnown RBP3.65□□□□□ -1.83
RPL39-201ENST00000361575 KITLGP21583 273 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 ZP3P21754 424 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 CD1CP29017 333 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 CASP14P31944 242 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 LRRC36Q1X8D7 754 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 C15orf32Q32M92 178 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 KLF17Q5JT82 389 aaPredicted RBP3.65□□□□□ -1.83
RPL39-201ENST00000361575 ATAD3CQ5T2N8 411 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 OR52E8Q6IFG1 317 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 ACOT7LQ6ZUV0 252 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 FRA10AC1Q70Z53 315 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 CXorf40BQ96DE9 158 aa3.65□□□□□ -1.83
RPL39-201ENST00000361575 CNN2Q99439 309 aaKnown RBP3.65□□□□□ -1.83
RPL39-201ENST00000361575 GAL3ST1Q99999 423 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms