RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 UBQLNLQ8IYU4 475 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 TMEM239Q8WW34 195 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 ABTB1Q969K4 478 aaPredicted RBP22.86■■□□□ 1.25
SSBP3-202ENST00000357475 KTI12Q96EK9 354 aaPredicted RBP22.86■■□□□ 1.25
SSBP3-202ENST00000357475 MPP4Q96JB8 637 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 ALPK1Q96QP1 1244 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 SLX1AQ9BQ83 275 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 C20orf141Q9NUB4 165 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 PRDM4Q9UKN5 801 aa22.86■■□□□ 1.25
SSBP3-202ENST00000357475 SEC14L5O43304 696 aa22.85■■□□□ 1.25
SSBP3-202ENST00000357475 HCN1O60741 890 aa22.85■■□□□ 1.25
SSBP3-202ENST00000357475 NPIPB7O75200 414 aa22.85■■□□□ 1.25
SSBP3-202ENST00000357475 DEAF1O75398 565 aaPredicted RBP22.85■■□□□ 1.25
SSBP3-202ENST00000357475 RAC1P63000 192 aa22.85■■□□□ 1.25
SSBP3-202ENST00000357475 TMEM176BQ3YBM2 270 aaPredicted RBP22.85■■□□□ 1.25
SSBP3-202ENST00000357475 SYT14P1Q58G82 188 aa22.85■■□□□ 1.25
SSBP3-202ENST00000357475 NHSL2Q5HYW2 709 aa22.85■■□□□ 1.25
SSBP3-202ENST00000357475 VASNQ6EMK4 673 aa22.85■■□□□ 1.25
SSBP3-202ENST00000357475 TIMP4Q99727 224 aa22.85■■□□□ 1.25
SSBP3-202ENST00000357475 ANKRD19PQ9H560 264 aa22.85■■□□□ 1.25
SSBP3-202ENST00000357475 SERINC1Q9NRX5 453 aa22.85■■□□□ 1.25
SSBP3-202ENST00000357475 NKX1-2Q9UD57 310 aaPredicted RBP22.85■■□□□ 1.25
SSBP3-202ENST00000357475 KIAA1549Q9HCM3 1950 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 SH3PXD2BA1X283 911 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 LRRN3E7EW58 273 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 ZNF208O43345 1280 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 PRB1P04280 392 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 TFPIP10646 304 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 FCGR1AP12314 374 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 CLDN18P56856 261 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 CTU2Q2VPK5 515 aaKnown RBP22.84■■□□□ 1.25
SSBP3-202ENST00000357475 TTC33Q6PID6 262 aaPredicted RBP22.84■■□□□ 1.25
SSBP3-202ENST00000357475 NRMQ8IXM6 262 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 PQLC1Q8N2U9 271 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 ACOT11Q8WXI4 607 aaPredicted RBP22.84■■□□□ 1.25
SSBP3-202ENST00000357475 TMEM43Q9BTV4 400 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 PTDSS2Q9BVG9 487 aa22.84■■□□□ 1.25
SSBP3-202ENST00000357475 A0A0J9YW62 118 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 A8MVM7 634 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 AQP7O14520 342 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 ANPEPP15144 967 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 RPS5P46782 204 aaKnown RBP22.83■■□□□ 1.25
SSBP3-202ENST00000357475 SRYQ05066 204 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 ANKRD34AQ69YU3 496 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 ZNF730Q6ZMV8 503 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 PRICKLE2Q7Z3G6 844 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 OR9Q2Q8NGE9 314 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 EPYCQ99645 322 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 AP4B1Q9Y6B7 739 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 GTF3C1Q12789 2109 aa22.83■■□□□ 1.25
SSBP3-202ENST00000357475 NPIPA2E9PIF3 369 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 NPIPA3F8WFD2 350 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 TNFSF11O14788 317 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 ACTL6AO96019 429 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 IMPDH2P12268 514 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 ZNF708P17019 499 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 RBM34P42696 430 aaKnown RBP22.82■■□□□ 1.24
SSBP3-202ENST00000357475 SMIM11AP58511 58 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 LTBQ06643 244 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 MYBPHQ13203 477 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.82■■□□□ 1.24
SSBP3-202ENST00000357475 C1orf140Q5VVS0 124 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 OR4K5Q8NGD3 323 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 TAAR8Q969N4 342 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 KLHL15Q96M94 604 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 OR5B2Q96R09 309 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 COQ10BQ9H8M1 238 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 MGRN1O60291 552 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 E2F6O75461 281 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 FUT1P19526 365 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 CBLP22681 906 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 PLXDC2Q6UX71 529 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 MBOAT2Q6ZWT7 520 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 ICA1LQ8NDH6 482 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 CPT1CQ8TCG5 803 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 DDIT4LQ96D03 193 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 CENPNQ96H22 339 aaPredicted RBP22.82■■□□□ 1.24
SSBP3-202ENST00000357475 WDYHV1Q96HA8 205 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 ADGRG7Q96K78 797 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 MED31Q9Y3C7 131 aa22.82■■□□□ 1.24
SSBP3-202ENST00000357475 CFAP46Q8IYW2 2715 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 COL6A6A6NMZ7 2263 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 ENO4A6NNW6 628 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 EIF1AYO14602 144 aaKnown RBP22.81■■□□□ 1.24
SSBP3-202ENST00000357475 KLK2P20151 261 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 PRKACGP22612 351 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 DNAJA1P31689 397 aaKnown RBP22.81■■□□□ 1.24
SSBP3-202ENST00000357475 ZNF770Q6IQ21 691 aaPredicted RBP22.81■■□□□ 1.24
SSBP3-202ENST00000357475 EPHX4Q8IUS5 362 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 GHDCQ8N2G8 530 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 LSM14AQ8ND56 463 aaKnown RBP22.81■■□□□ 1.24
SSBP3-202ENST00000357475 STK35Q8TDR2 534 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 SLC25A43Q8WUT9 341 aaPredicted RBP22.81■■□□□ 1.24
SSBP3-202ENST00000357475 HS6ST2Q96MM7 605 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 MOGAT1Q96PD6 335 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 GPA33Q99795 319 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 BDH2Q9BUT1 245 aa22.81■■□□□ 1.24
SSBP3-202ENST00000357475 RALYQ9UKM9 306 aaKnown RBP22.81■■□□□ 1.24
SSBP3-202ENST00000357475 SPIN1Q9Y657 262 aaPredicted RBP22.81■■□□□ 1.24
SSBP3-202ENST00000357475 SAC3D1A6NKF1 404 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms