RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 PYCARD-AS1I3L0S3 204 aa6.84□□□□□ -1.32
VPS13A-202ENST00000357409 NXPH2O95156 264 aa6.84□□□□□ -1.32
VPS13A-202ENST00000357409 CRYBA1P05813 215 aa6.84□□□□□ -1.32
VPS13A-202ENST00000357409 GFERP55789 205 aa6.84□□□□□ -1.32
VPS13A-202ENST00000357409 MS4A2Q01362 244 aa6.84□□□□□ -1.32
VPS13A-202ENST00000357409 MED25Q71SY5 747 aa6.84□□□□□ -1.32
VPS13A-202ENST00000357409 TMPRSS7Q7RTY8 843 aa6.84□□□□□ -1.32
VPS13A-202ENST00000357409 TMEM200AQ86VY9 491 aa6.84□□□□□ -1.32
VPS13A-202ENST00000357409 ABHD4Q8TB40 342 aa6.84□□□□□ -1.32
VPS13A-202ENST00000357409 INTS12Q96CB8 462 aaKnown RBP6.84□□□□□ -1.32
VPS13A-202ENST00000357409 A0A1W2PPV4 95 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF623O75123 536 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SERPINE2P07093 398 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 HABP2Q14520 560 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 PRTGQ2VWP7 1150 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 ARHGAP12Q8IWW6 846 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 PLPP7Q8NBV4 271 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 FAM83FQ8NEG4 500 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 OR2T27Q8NH04 317 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SELENOIQ9C0D9 397 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 PLCXD1Q9NUJ7 323 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 COL1A1P02452 1464 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 CENPBD1B2RD01 187 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 H0YAE9 185 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 NME4O00746 187 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 LGI1O95970 557 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 ARSBP15848 533 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SHC1P29353 583 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 HBA1P69905 142 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SLC35A2P78381 396 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF404Q494X3 552 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 C6orf141Q5SZD1 244 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 GUSBP11Q6P575 273 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 MARVELD2Q8N4S9 558 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SLC12A9Q9BXP2 914 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 HIPK2Q9H2X6 1198 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 AIG1Q9NVV5 245 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 GPR160Q9UJ42 338 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 PCDHGA7Q9Y5G6 932 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 DNAJC25-GNG10A0A024R161 153 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 ARPC5O15511 151 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SNAPC5O75971 98 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 GASTP01350 101 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 EVI2BP34910 448 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 RRAS2P62070 204 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SELENOWP63302 87 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 DPY19L1Q2PZI1 675 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 PKDCCQ504Y2 493 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SPRED2Q7Z698 418 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SPARTQ8N0X7 666 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 AMBRA1Q9C0C7 1298 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 MARCH5Q9NX47 278 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 A1L4Q6 167 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 CD300LBA8K4G0 201 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 PRRG2O14669 202 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 GPANK1O95872 356 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SLC36A2Q495M3 483 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 FAM69AQ5T7M9 428 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 KCTD20Q7Z5Y7 419 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 WFDC3Q8IUB2 231 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 RBMXL3Q8N7X1 1067 aaKnown RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 P2RY12Q9H244 342 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 WDR6Q9NNW5 1121 aaKnown RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 EHFQ9NZC4 300 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SIRPB1O00241 398 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 C2orf76Q3KRA6 126 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 PM20D2Q8IYS1 436 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 LILRA2Q8N149 483 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 FTMTQ8N4E7 242 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 ACPTQ9BZG2 426 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 MSL2Q9HCI7 577 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 A0A087WUU8 490 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 RAB3DO95716 219 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SNRPCP09234 159 aaKnown RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 NPBWR1P48145 328 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 P2RX1P51575 399 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 P2RX3P56373 397 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 TSSK2Q96PF2 358 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 C20orf27Q9GZN8 174 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 CHST6Q9GZX3 395 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 FAM124BQ9H5Z6 455 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 EMC7Q9NPA0 242 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 TMEM100Q9NV29 134 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 FAIMQ9NVQ4 179 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF443Q9Y2A4 671 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 A0A096LPI6 279 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 A0A0B4J2A0 478 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 AQP12BA6NM10 295 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 FAM157AC9JC47 383 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 MASP2O00187 686 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SELENOFO60613 162 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 HOXB9P17482 250 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 CLDN8P56748 225 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 MAB21L1Q13394 359 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 HES3Q5TGS1 186 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 AQP12AQ8IXF9 295 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SFXN5Q8TD22 340 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 OR5B12Q96R08 314 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SHPKQ9UHJ6 478 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms