RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 EGFL6Q8IUX8 553 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 LILRA2Q8N149 483 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 WDSUB1Q8N9V3 476 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 VN1R2Q8NFZ6 395 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 OR7G2Q8NG99 324 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 OR2T11Q8NH01 316 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 OR52N1Q8NH53 320 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 CHTF18Q8WVB6 975 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 C22orf15Q8WYQ4 148 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 C1QTNF3Q9BXJ4 246 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 NOX3Q9HBY0 568 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 KCMF1Q9P0J7 381 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 DNMT3BQ9UBC3 853 aaKnown RBP10.95□□□□□ -0.66
COL9A1-202ENST00000357250 BCL2A1Q16548 175 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 SLX4IPQ5VYV7 408 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 GAREM2Q75VX8 874 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 EID2Q8N6I1 236 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF611Q8N823 705 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 TBC1D15Q8TC07 691 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 GLYATL2Q8WU03 294 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 SMAP2Q8WU79 429 aaPredicted RBP10.95□□□□□ -0.66
COL9A1-202ENST00000357250 DCUN1D4Q92564 292 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 SLCO5A1Q9H2Y9 848 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 CUTCQ9NTM9 273 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 NXT1Q9UKK6 140 aaKnown RBP10.95□□□□□ -0.66
COL9A1-202ENST00000357250 TMEM269A0A1B0GVZ9 245 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 H3BML4 177 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 UBFD1O14562 309 aaKnown RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 HPGDSO60760 199 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 CXCL12P48061 93 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 CLDN2P57739 230 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 ERVK-16P61578 105 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 GLB1L2Q8IW92 636 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 LILRB2Q8N423 598 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF784Q8NCA9 323 aaPredicted RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 SIMC1Q8NDZ2 872 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 OR7G1Q8NGA0 311 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 ZBTB8AQ96BR9 441 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 LYSMD1Q96S90 227 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 MMP28Q9H239 520 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 P2RY12Q9H244 342 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 LAMB2P55268 1798 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 FAM230AA0A1W2PPH8 454 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 PTHP01270 115 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 GASTP01350 101 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 SLC35E2P0CK97 266 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 SNRPGP62308 76 aaKnown RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 CXADRP78310 365 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 EXOSC7Q15024 291 aaKnown RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 LYSMD4Q5XG99 296 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF761Q86XN6 746 aaPredicted RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 OR1J4Q8NGS1 313 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 PFDN5Q99471 154 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 ZBP1Q9H171 429 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 EGLN3Q9H6Z9 239 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 ETV7Q9Y603 341 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 SERINC4A6NH21 518 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 C1orf196B1AJZ1 125 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 ARHGAP33O14559 1287 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 UBL3O95164 117 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 HTR1FP30939 366 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 SFTPDP35247 375 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 IL13RA1P78552 427 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 LTBQ06643 244 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 USF2Q15853 346 aaPredicted RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 SLC35D3Q5M8T2 416 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 FCRLBQ6BAA4 426 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 MAVSQ7Z434 540 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 MKXQ8IYA7 352 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 MMP21Q8N119 569 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 C19orf47Q8N9M1 422 aaKnown RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 DUS3LQ96G46 650 aaKnown RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 ARL5BQ96KC2 179 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 SLC46A1Q96NT5 459 aa10.94□□□□□ -0.66
COL9A1-202ENST00000357250 RBFOX1Q9NWB1 397 aaKnown RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 ATXN7L1Q9ULK2 861 aaPredicted RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 COL5A3P25940 1745 aaPredicted RBP10.94□□□□□ -0.66
COL9A1-202ENST00000357250 TRAV27A0A087WT01 109 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 TRBV4-1A0A0J9YWV2 114 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 D6RAR5 112 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 CX3CR1P49238 355 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 TMEM201Q5SNT2 666 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 OTUD1Q5VV17 481 aaPredicted RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 FAM71E1Q6IPT2 247 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 VASH1Q7L8A9 365 aaPredicted RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 PPP1R3BQ86XI6 285 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 FUNDC1Q8IVP5 155 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 WFDC5Q8TCV5 224 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 LINC01599Q8WXQ3 324 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 ARRDC3Q96B67 414 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SLC41A2Q96JW4 573 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF285Q96NJ3 590 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SLC25A31Q9H0C2 315 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 THAP10Q9P2Z0 257 aaPredicted RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 FAM171A2A8MVW0 826 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 B4DXG7 233 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 F5H5K5 113 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 TNFRSF10CO14798 259 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 YKT6O15498 198 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SDC3O75056 442 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms