RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ATG12O94817 140 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 PSMB1P20618 241 aaKnown RBP13.08□□□□□ -0.31
SREBF1-202ENST00000355815 VAMP2P63027 116 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 RBM39Q14498 530 aaKnown RBP13.08□□□□□ -0.31
SREBF1-202ENST00000355815 CDKN3Q16667 212 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 AKR1C8PQ5T2L2 129 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 FAM109BQ6ICB4 259 aaPredicted RBP13.08□□□□□ -0.31
SREBF1-202ENST00000355815 ADAM5Q6NVV9 412 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 FAAP20Q6NZ36 180 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 LIX1LQ8IVB5 337 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 LRRC25Q8N386 305 aaPredicted RBP13.08□□□□□ -0.31
SREBF1-202ENST00000355815 ANKRD53Q8N9V6 530 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 ZG16BQ96DA0 208 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 ASIC5Q9NY37 505 aa13.08□□□□□ -0.31
SREBF1-202ENST00000355815 hCG_1807616A0A1W2PRN6 198 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 OR2W5A6NFC9 320 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 LRRTM2O43300 516 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 NTN1O95631 604 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 TSPAN15O95858 294 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 ZNF20P17024 532 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 PRSS3P35030 304 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 RBMXP38159 391 aaKnown RBP13.08□□□□□ -0.32
SREBF1-202ENST00000355815 SLC6A9P48067 706 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 SPIN3Q5JUX0 258 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 TCTN3Q6NUS6 607 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 KIAA1211LQ6NV74 962 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 FIGLAQ6QHK4 219 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 CAMKVQ8NCB2 501 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 NANPQ8TBE9 248 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 PEX11GQ96HA9 241 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 ZMAT3Q9HA38 289 aaKnown RBP13.08□□□□□ -0.32
SREBF1-202ENST00000355815 FLVCR2Q9UPI3 526 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 OLFM2O95897 454 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 KNG1P01042 644 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 RAF1P04049 648 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 CXCR1P25024 350 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 NTSR1P30989 418 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 HOXA9P31269 272 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 BCL6P41182 706 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 LUMP51884 338 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-202ENST00000355815 FAM74A1Q5RGS3 127 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 ZNF547Q8IVP9 402 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 SDR9C7Q8NEX9 313 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 SYNPRQ8TBG9 265 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 PHOSPHO1Q8TCT1 267 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 GCDHQ92947 438 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-202ENST00000355815 FAM46BQ96A09 425 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 SLC22A18Q96BI1 424 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 YIPF6Q96EC8 236 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 RPP25Q9BUL9 199 aaKnown RBP13.08□□□□□ -0.32
SREBF1-202ENST00000355815 TMEM231Q9H6L2 316 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 FGF22Q9HCT0 170 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 ZNF701Q9NV72 531 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-202ENST00000355815 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
SREBF1-202ENST00000355815 SGK494L7N484 410 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 CLDN4O14493 209 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 HCKP08631 526 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 MMP11P24347 488 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 ELAVL4P26378 380 aaKnown RBP13.08□□□□□ -0.32
SREBF1-202ENST00000355815 GALK2Q01415 458 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 POU4F2Q12837 409 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.326e-6■□□□□ 8.6
SREBF1-202ENST00000355815 ALKBH2Q6NS38 261 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 USP53Q70EK8 1073 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 SVBPQ8N300 66 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 WDSUB1Q8N9V3 476 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 OR5T3Q8NGG3 340 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 THAP4Q8WY91 577 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 FOXN4Q96NZ1 517 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 OR7D2Q96RA2 312 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 GPR174Q9BXC1 333 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 TUBG2Q9NRH3 451 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 GPATCH2Q9NW75 528 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 BABAM2Q9NXR7 383 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 SAGE1Q9NXZ1 904 aa13.08□□□□□ -0.32
SREBF1-202ENST00000355815 PSME4Q14997 1843 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 DRD2P14416 443 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 PEA15Q15121 130 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 PLK5Q496M5 336 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 TTLL10Q6ZVT0 673 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 OR5T2Q8NGG2 359 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 THAP3Q8WTV1 239 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-202ENST00000355815 NR4A3Q92570 626 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 MMABQ96EY8 250 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-202ENST00000355815 SSX3Q99909 188 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
SREBF1-202ENST00000355815 ZDBF2Q9HCK1 2354 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 TRAV27A0A087WT01 109 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 A0A1W2PS29 197 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 TCRBV21S2A2A0A5A6 115 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 KIAA0355O15063 1070 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 WDPCPO95876 746 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 F3P13726 295 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 C5AR1P21730 350 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 LIM2P55344 173 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 EIF2B1Q14232 305 aaKnown RBP13.07□□□□□ -0.32
SREBF1-202ENST00000355815 C21orf62-AS1Q17RA5 79 aa13.07□□□□□ -0.32
SREBF1-202ENST00000355815 TMEM205Q6UW68 189 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms