RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PRKCAP17252 672 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 ATF1P18846 271 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 NPR2P20594 1047 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 PTBP1P26599 531 aaKnown RBP eCLIP18■□□□□ 0.47
COL13A1-201ENST00000354547 GDI2P50395 445 aaKnown RBP18■□□□□ 0.47
COL13A1-201ENST00000354547 GPLD1P80108 840 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 DLX2Q07687 328 aaPredicted RBP18■□□□□ 0.47
COL13A1-201ENST00000354547 STX4Q12846 297 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 RIN1Q13671 783 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 GCDHQ92947 438 aaPredicted RBP18■□□□□ 0.47
COL13A1-201ENST00000354547 DZANK1Q9NVP4 752 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 DNAJB12Q9NXW2 375 aaKnown RBP18■□□□□ 0.47
COL13A1-201ENST00000354547 SEC16AO15027 2179 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 H3BSH0 61 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 GMFGO60234 142 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 SELENOFO60613 162 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 CCR6P51684 374 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 ZNHIT3Q15649 155 aaPredicted RBP17.99■□□□□ 0.47
COL13A1-201ENST00000354547 AVL9Q8NBF6 648 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 ZNF671Q8TAW3 534 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 ZPLD1Q8TCW7 415 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 PELI1Q96FA3 418 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 MED28Q9H204 178 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 FOLH1BQ9HBA9 442 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 LRIT1Q9P2V4 623 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 CENPBD1B2RD01 187 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 ZNF780AO75290 641 aaPredicted RBP17.99■□□□□ 0.47
COL13A1-201ENST00000354547 SOX30O94993 753 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 GAAP10253 952 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 GIFP27352 417 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 RBMS1P29558 406 aaKnown RBP17.99■□□□□ 0.47
COL13A1-201ENST00000354547 RPLP0P6Q8NHW5 317 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 RIT1Q92963 219 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 RELTQ969Z4 430 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 CREB3L1Q96BA8 519 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 NKX2-4Q9H2Z4 354 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 NKIRAS2Q9NYR9 191 aa17.99■□□□□ 0.47
COL13A1-201ENST00000354547 TRBV2A0A0J9YWF9 115 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 FABP7O15540 132 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 C1QBP02746 253 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 GALP22466 123 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 EDNRAP25101 427 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 BTG2P78543 158 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 DMKNQ6E0U4 476 aaPredicted RBP17.98■□□□□ 0.47
COL13A1-201ENST00000354547 TOMM5Q8N4H5 51 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 ZNF433Q8N7K0 673 aaPredicted RBP17.98■□□□□ 0.47
COL13A1-201ENST00000354547 RCBTB1Q8NDN9 531 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 HSD17B8Q92506 261 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 SLC25A18Q9H1K4 315 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 TICRRQ7Z2Z1 1910 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 A0A0J9YY10 115 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 FMO6PO60774 539 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 NKX2-2O95096 273 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 NRG3P56975 720 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 SHHQ15465 462 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 RASD2Q96D21 266 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 OR10H1Q9Y4A9 318 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 TCRBV21S2A2A0A5A6 115 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 TGFBR3LH3BV60 316 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 CCR4P51679 360 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 ERVK-25P63136 954 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 FHL1Q13642 323 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 PLA1AQ53H76 456 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 ARHGAP11AQ6P4F7 1023 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 SIAH3Q8IW03 269 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 C10orf53Q8N6V4 93 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 OR4C3Q8NH37 302 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 FAM131CQ96AQ9 280 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 CTHRC1Q96CG8 243 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 UBL7Q96S82 380 aaPredicted RBP17.98■□□□□ 0.47
COL13A1-201ENST00000354547 LMAN2LQ9H0V9 348 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 IRF2BPLQ9H1B7 796 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 INPP5EQ9NRR6 644 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 WBP1LQ9NX94 342 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 ST6GALNAC2Q9UJ37 374 aa17.98■□□□□ 0.47
COL13A1-201ENST00000354547 TMA7Q9Y2S6 64 aaKnown RBP17.98■□□□□ 0.47
COL13A1-201ENST00000354547 A0A087WV48 116 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 ERVH48-1M5A8F1 160 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 MT-ND4P03905 459 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 BTCP35070 178 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 MAP3K8P41279 467 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 TAS2R43P59537 309 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 HYAL1Q12794 435 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 OOSP2Q86WS3 158 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 SLC22A18ASQ8N1D0 253 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 DERL3Q96Q80 235 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 C14orf105Q9NVL8 296 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 TEKT2Q9UIF3 430 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 MPDZO75970 2070 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 BLOC1S5-TXNDC5H3BN57 136 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 HES5Q5TA89 166 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 UBE2Q1Q7Z7E8 422 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 SERPINA12Q8IW75 414 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 CNN2Q99439 309 aaKnown RBP17.97■□□□□ 0.47
COL13A1-201ENST00000354547 TRIM2Q9C040 744 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 COPS3Q9UNS2 423 aa17.97■□□□□ 0.47
COL13A1-201ENST00000354547 ANKRD61A6NGH8 418 aa17.96■□□□□ 0.47
COL13A1-201ENST00000354547 ACOD1A6NK06 481 aa17.96■□□□□ 0.47
COL13A1-201ENST00000354547 FLRT2O43155 660 aa17.96■□□□□ 0.47
COL13A1-201ENST00000354547 AK1P00568 194 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms