RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 TCTN2Q96GX1 697 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 ZNF285Q96NJ3 590 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 FYTTD1Q96QD9 318 aaKnown RBP20.31■□□□□ 0.84
UPF3A-201ENST00000351487 NPFFR2Q9Y5X5 522 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 SPTBP11277 2137 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 A0A1W2PPC4 97 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 PPM1BO75688 479 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 SERPINA3P01011 423 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 CSTAP01040 98 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 MAT1AQ00266 395 aaKnown RBP20.31■□□□□ 0.84
UPF3A-201ENST00000351487 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.31■□□□□ 0.84
UPF3A-201ENST00000351487 IL20RBQ6UXL0 311 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 TCTE3Q8IZS6 198 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 DNAJC5GQ8N7S2 189 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 BCORP1Q8N888 145 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 SMIM19Q96E16 107 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 ORAI3Q9BRQ5 295 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 GPR174Q9BXC1 333 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 LRIT1Q9P2V4 623 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 IER3IP1Q9Y5U9 82 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 ALG5Q9Y673 324 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 CLCA3PQ9Y6N3 262 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 TRAV1-2A0A0B4J238 106 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 FAM47E-STBD1D6RA91 191 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 GLULP15104 373 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 TCEA1P23193 301 aaKnown RBP20.3■□□□□ 0.84
UPF3A-201ENST00000351487 MAZP56270 477 aaKnown RBP20.3■□□□□ 0.84
UPF3A-201ENST00000351487 BTG2P78543 158 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 ISXQ2M1V0 245 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 CDONQ4KMG0 1287 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 PAMR1Q6UXH9 720 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 DPY19L2P2Q6ZN68 376 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 NOXA1Q86UR1 476 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 KLHDC7BQ96G42 594 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 WSB2Q9NYS7 404 aaPredicted RBP20.3■□□□□ 0.84
UPF3A-201ENST00000351487 ERVK-19Q9WJR5 959 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 SLCO1B1Q9Y6L6 691 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 DNAH14Q0VDD8 3507 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 ARPC3O15145 178 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 CD1AP06126 327 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 YES1P07947 543 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 S100A1P23297 94 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 CAPZBP47756 277 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 FASLGP48023 281 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 PITPNBP48739 271 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 CDK5R1Q15078 307 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 NDUFAF6Q330K2 333 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 CCDC92Q53HC0 331 aaPredicted RBP20.3■□□□□ 0.84
UPF3A-201ENST00000351487 ZNF57Q68EA5 555 aaPredicted RBP20.3■□□□□ 0.84
UPF3A-201ENST00000351487 TIGD3Q6B0B8 471 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 OR4C3Q8NH37 302 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 PELI1Q96FA3 418 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 MAP3K3Q99759 626 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 WACQ9BTA9 647 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 MFRPQ9BY79 579 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 OR10A5Q9H207 317 aa20.3■□□□□ 0.84
UPF3A-201ENST00000351487 GNB5O14775 395 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 ORC5O43913 435 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 GABRA4P48169 554 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 RPS4XP62701 263 aaKnown RBP20.29■□□□□ 0.84
UPF3A-201ENST00000351487 LGALS3BPQ08380 585 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 NNATQ16517 81 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 TP53I3Q53FA7 332 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 UTS2BQ765I0 119 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 LRRC17Q8N6Y2 441 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 ZNF615Q8N8J6 731 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 OR14A16Q8NHC5 309 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 TRMT10AQ8TBZ6 339 aaKnown RBP20.29■□□□□ 0.84
UPF3A-201ENST00000351487 RFT1Q96AA3 541 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 DDOQ99489 341 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 SLC19A3Q9BZV2 496 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 OR10H1Q9Y4A9 318 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 KNL1Q8NG31 2342 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.29■□□□□ 0.84
UPF3A-201ENST00000351487 RAB3BP20337 219 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 HSD17B7P56937 341 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 ERV3-1Q14264 604 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 SLC35F2Q8IXU6 374 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 ZNF440Q8IYI8 595 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 ARL14Q8N4G2 192 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 FAM71CQ8NEG0 241 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 FAM174AQ8TBP5 190 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 CREB3L1Q96BA8 519 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 C3orf49Q96BT1 292 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 CCNL2Q96S94 520 aaPredicted RBP20.29■□□□□ 0.84
UPF3A-201ENST00000351487 GPX7Q96SL4 187 aaPredicted RBP20.29■□□□□ 0.84
UPF3A-201ENST00000351487 NRIP3Q9NQ35 241 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 KLHL1Q9NR64 748 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 ZNF337Q9Y3M9 751 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 ADAM18Q9Y3Q7 739 aa20.29■□□□□ 0.84
UPF3A-201ENST00000351487 THADAQ6YHU6 1953 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 A0A1W2PRG6 482 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 C2CD4DB7Z1M9 353 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 MAOAP21397 527 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 SLC6A1P30531 599 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 GALNSP34059 522 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 DIO1P49895 249 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 GDI2P50395 445 aaKnown RBP20.28■□□□□ 0.84
UPF3A-201ENST00000351487 GBX2P52951 348 aaPredicted RBP20.28■□□□□ 0.84
UPF3A-201ENST00000351487 CD83Q01151 205 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms