RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZNF561Q8N587 486 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 OR1S1Q8NH92 325 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 TMEM174Q8WUU8 243 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 LIN7BQ9HAP6 207 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 PIGBOS1A0A0B4J2F0 54 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 TMEM225BP0DP42 221 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 CPEP16870 476 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 HTR1FP30939 366 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 NOVP48745 357 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 SNU13P55769 128 aaKnown RBP11.31□□□□□ -0.6
COL12A1-202ENST00000345356 LMAN2Q12907 356 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 CARD17Q5XLA6 110 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 AKR7LQ8NHP1 331 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 SLC38A5Q8WUX1 472 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 FBXW5Q969U6 566 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 CSF3RQ99062 836 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 PITX2Q99697 317 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 GABARAPL3Q9BY60 117 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 NOX4Q9NPH5 578 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 C2orf42Q9NWW7 574 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 PRODH2Q9UF12 536 aa11.31□□□□□ -0.6
COL12A1-202ENST00000345356 C6P13671 934 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 CCNOP22674 350 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 CD80P33681 288 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 CCINQ13939 588 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 HSF5Q4G112 596 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-202ENST00000345356 OR13C9Q8NGT0 318 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 HERVK_113Q902F9 699 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 PDLIM5Q96HC4 596 aaKnown RBP11.3□□□□□ -0.6
COL12A1-202ENST00000345356 SLC25A31Q9H0C2 315 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 FLVCR2Q9UPI3 526 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 TMEM129A0AVI4 362 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 TMEM72A0PK05 275 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 TMEM235A6NFC5 223 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 SOCS7O14512 581 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 GPR171O14626 319 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 OR2F2O95006 317 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 G0S2P27469 103 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 OR2F1Q13607 317 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 COX20Q5RI15 118 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 TMEM225Q6GV28 225 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 USP51Q70EK9 711 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 EID2Q8N6I1 236 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 NPRL2Q8WTW4 380 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 PNPLA2Q96AD5 504 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 PLEKHM1Q9Y4G2 1056 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 NPFFR2Q9Y5X5 522 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 GON4LQ3T8J9 2241 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 MEOX2P50222 304 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 RAP1AP62834 184 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 PRSS36Q5K4E3 855 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 NDUFAF7Q7L592 441 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 OR51S1Q8NGJ8 323 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 SMIM14Q96QK8 99 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 VPS25Q9BRG1 176 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 FMN2Q9NZ56 1722 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 NPIPA5A0A0B4J1W7 369 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 NPIPA7E9PJI5 369 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 FZD9O00144 591 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 LILRB5O75023 590 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 EDN1P05305 212 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 NPIPA8P0DM63 369 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 GPX2P18283 190 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 XKR7Q5GH72 579 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 ADGRG3Q86Y34 549 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 ZNF440Q8IYI8 595 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 OR52I2Q8NH67 350 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 RNF128Q8TEB7 428 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 GAREM1Q9H706 876 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 FN3KRPQ9HA64 309 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 TRAPPC4Q9Y296 219 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 CX3CR1P49238 355 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 ZNF41P51814 821 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-202ENST00000345356 SYT14P1Q58G82 188 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 OR4K15Q8NH41 348 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 EHFQ9NZC4 300 aa11.3□□□□□ -0.6
COL12A1-202ENST00000345356 KDM4FA0A1W2PPD8 638 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 SCO2O43819 266 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 ATXN1LP0C7T5 689 aaKnown RBP11.29□□□□□ -0.6
COL12A1-202ENST00000345356 APEHP13798 732 aaKnown RBP11.29□□□□□ -0.6
COL12A1-202ENST00000345356 RAB4AP20338 218 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 SLC16A12Q6ZSM3 486 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 RDH10Q8IZV5 341 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 PRTFDC1Q9NRG1 225 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 PLEKHJ1Q9NW61 149 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 GAB2Q9UQC2 676 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 OR1A2Q9Y585 309 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 CCDC163A0A0D9SF12 145 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 GABARAPH6UMI1 98 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 EDIL3O43854 480 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 GJB3O75712 270 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 NQO2P16083 231 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 GRM7Q14831 915 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 ZNF805Q5CZA5 627 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 MAMDC2Q7Z304 686 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-202ENST00000345356 OR13C2Q8NGS9 318 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 TMEM234Q8WY98 164 aa11.29□□□□□ -0.6
COL12A1-202ENST00000345356 NICN1Q9BSH3 213 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms