RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 CSNK1A1LQ8N752 337 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 CLRN3Q8NCR9 226 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 MMABQ96EY8 250 aaPredicted RBP16.87■□□□□ 0.29
SMC4-201ENST00000344722 ZAR1LA6NP61 321 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 EFCAB7A8K855 629 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 GABARAPH6UMI1 98 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 IFNGR1P15260 489 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 FPR3P25089 353 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 RGRP47804 291 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 CLDN12P56749 244 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 PGBD5Q8N414 524 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 MED20Q9H944 212 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 ADAM29Q9UKF5 820 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 PUS1Q9Y606 427 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMC4-201ENST00000344722 DVL2O14641 736 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 LATO43561 262 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 KCNJ13O60928 360 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 PAPLNO95428 1278 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 HOXC13P31276 330 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 SERPINF1P36955 418 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 RPE65Q16518 533 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 ZMAT1Q5H9K5 638 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 TRAPPC6BQ86SZ2 158 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 ZNF480Q8WV37 535 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 GPATCH2Q9NW75 528 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 WIF1Q9Y5W5 379 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 KPTNQ9Y664 436 aa16.87■□□□□ 0.29
SMC4-201ENST00000344722 SCO2O43819 266 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 PAQR9Q6ZVX9 377 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 TMEM179BQ7Z7N9 219 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 ACOT4Q8N9L9 421 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 OR52H1Q8NGJ2 320 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 ASB17Q8WXJ9 295 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 NEURL3Q96EH8 262 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 C14orf79Q96F83 325 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 ACER3Q9NUN7 267 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 FBXL4Q9UKA2 621 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 SCML1Q9UN30 329 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 NWD2Q9ULI1 1742 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 TMEM200CA6NKL6 621 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 H3BUI4 141 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 SERPINA5P05154 406 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 NDUFAF7Q7L592 441 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 OR5D14Q8NGL3 314 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 BRI3BPQ8WY22 251 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 UCN3Q969E3 161 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 LIN37Q96GY3 246 aaPredicted RBP16.86■□□□□ 0.29
SMC4-201ENST00000344722 PTCHD1Q96NR3 888 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 C1QTNF3Q9BXJ4 246 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 SLC22A11Q9NSA0 550 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 RLIMQ9NVW2 624 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 ANKRD12Q6UB98 2062 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 TMEM212A6NML5 194 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 OR2F2O95006 317 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 NME2P22392 152 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 TNFRSF17Q02223 184 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 OR2F1Q13607 317 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 OR6M1Q8NGM8 313 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 RRNAD1Q96FB5 475 aaKnown RBP16.86■□□□□ 0.29
SMC4-201ENST00000344722 OR6C6A6NF89 314 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 SYT5O00445 386 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 SOCS6O14544 535 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 HOXB5P09067 269 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 GATMP50440 423 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 NDUFA6P56556 154 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 SGCBQ16585 318 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 HIST2H3AQ71DI3 136 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 ZFP82Q8N141 532 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 SLC30A7Q8NEW0 376 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 KATNB1Q9BVA0 655 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 MCOLN1Q9GZU1 580 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 PRELID3BQ9Y3B1 194 aa16.86■□□□□ 0.29
SMC4-201ENST00000344722 AGAP14A8MT82 685 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 RGS13O14921 159 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 PPP1R2P9O14990 202 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 SBK3P0C264 359 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 KIR2DL3P43628 341 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 POU3F4P49335 361 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 FXYD4P59646 89 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 SHC2P98077 582 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 VASNQ6EMK4 673 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 OVCH1Q7RTY7 1134 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 OR1M1Q8NGA1 313 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 C2CD4CQ8TF44 421 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 DEFB118Q96PH6 123 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 SLC25A37Q9NYZ2 338 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 C1orf105O95561 183 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 ANXA7P20073 488 aaKnown RBP16.85■□□□□ 0.29
SMC4-201ENST00000344722 GLO1Q04760 184 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 YIF1BQ5BJH7 314 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 HIST2H3PS2Q5TEC6 136 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 IGSF21Q96ID5 467 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 SMIM14Q96QK8 99 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 A6NIZ1 184 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 ATG12O94817 140 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 RAP1BP61224 184 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 RAP1AP62834 184 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 RPS21P63220 83 aaKnown RBP16.85■□□□□ 0.29
SMC4-201ENST00000344722 SLC9A3R2Q15599 337 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 RDH10Q8IZV5 341 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms