RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TPBGQ13641 420 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 B3GLCTQ6Y288 498 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 PLPP5Q8NEB5 264 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 C1GALT1C1Q96EU7 318 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 ZC3H10Q96K80 434 aaKnown RBP17.03■□□□□ 0.32
HOXA9-201ENST00000343483 GTPBP2Q9BX10 602 aaKnown RBP17.03■□□□□ 0.32
HOXA9-201ENST00000343483 TGIF2Q9GZN2 237 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 MCCC2Q9HCC0 563 aa17.03■□□□□ 0.32
HOXA9-201ENST00000343483 GMFGO60234 142 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 SNX4O95219 450 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 SLC9A3P48764 834 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 TGM4P49221 684 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 NHLH1Q02575 133 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 LPAL2Q16609 132 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 RTL4Q6ZR62 310 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 GID4Q8IVV7 300 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 OIT3Q8WWZ8 545 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 SGTBQ96EQ0 304 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 ARHGAP9Q9BRR9 750 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 FN3KQ9H479 309 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 CMC2Q9NRP2 79 aa17.02■□□□□ 0.32
HOXA9-201ENST00000343483 NUP210LQ5VU65 1888 aa17.02■□□□□ 0.31
HOXA9-201ENST00000343483 ZC3H12DA2A288 527 aaKnown RBP17.01■□□□□ 0.31
HOXA9-201ENST00000343483 RIIAD1A6NNX1 92 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 IDSB3KWA1 339 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 LRRN3E7EW58 273 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 SLC30A4O14863 429 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 CER1O95813 267 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 PTTG1O95997 202 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 IL1AP01583 271 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 HEXBP07686 556 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 KLHL12Q53G59 568 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 WBP2NLQ6ICG8 309 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 NIPAL3Q6P499 406 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 LRRC17Q8N6Y2 441 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 OR51G2Q8NGK0 314 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 CEP76Q8TAP6 659 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 SLC25A46Q96AG3 418 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 MESP1Q9BRJ9 268 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 HCAR1Q9BXC0 346 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 EXOGQ9Y2C4 368 aaKnown RBP17.01■□□□□ 0.31
HOXA9-201ENST00000343483 SF3B6Q9Y3B4 125 aaKnown RBP17.01■□□□□ 0.31
HOXA9-201ENST00000343483 ELOA3DA6NLF2 546 aaPredicted RBP17.01■□□□□ 0.31
HOXA9-201ENST00000343483 LRRTM2O43300 516 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 SLC6A6P31641 620 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 NUBP1P53384 320 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 DEFA1P59665 94 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 DEFA3P59666 94 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 DCDP81605 110 aaKnown RBP17.01■□□□□ 0.31
HOXA9-201ENST00000343483 CD300CQ08708 224 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 FHL1Q13642 323 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 ELOA3BQ3SY89 546 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 CRTC2Q53ET0 693 aaPredicted RBP17.01■□□□□ 0.31
HOXA9-201ENST00000343483 PPP1R3BQ86XI6 285 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 ZFP41Q8N8Y5 198 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 ELOA3Q8NG57 546 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 OMA1Q96E52 524 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 KCTD7Q96MP8 289 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 GFM1Q96RP9 751 aaKnown RBP17.01■□□□□ 0.31
HOXA9-201ENST00000343483 SDHCQ99643 169 aaPredicted RBP17.01■□□□□ 0.31
HOXA9-201ENST00000343483 TM9SF2Q99805 663 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 CCDC32Q9BV29 185 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 APMAPQ9HDC9 416 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 EXOSC3Q9NQT5 275 aaKnown RBP17.01■□□□□ 0.31
HOXA9-201ENST00000343483 ERVK13-1Q9NX77 482 aa17.01■□□□□ 0.31
HOXA9-201ENST00000343483 IGLV3-12A0A075B6K2 115 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 IQCMA0A1B0GVH7 501 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 OR6C76A6NM76 312 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 PRR23D1E9PI22 279 aaPredicted RBP17■□□□□ 0.31
HOXA9-201ENST00000343483 CLEC2LP0C7M8 214 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 PRR23D2P0DMB1 279 aaPredicted RBP17■□□□□ 0.31
HOXA9-201ENST00000343483 PAICSP22234 425 aaKnown RBP17■□□□□ 0.31
HOXA9-201ENST00000343483 ABCD3P28288 659 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 HOXD12P35452 270 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 SLC16A1P53985 500 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 HNRNPA0Q13151 305 aaKnown RBP17■□□□□ 0.31
HOXA9-201ENST00000343483 MEPCEQ7L2J0 689 aaKnown RBP17■□□□□ 0.31
HOXA9-201ENST00000343483 LAX1Q8IWV1 398 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 KLHL36Q8N4N3 616 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 SIRT6Q8N6T7 355 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF485Q8NCK3 441 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 ZBTB44Q8NCP5 570 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 ASB15Q8WXK1 588 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 SECISBP2Q96T21 854 aaKnown RBP17■□□□□ 0.31
HOXA9-201ENST00000343483 RTN4RQ9BZR6 473 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 TNFRSF10DQ9UBN6 386 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 FER1L5A0AVI2 2057 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 TO15178 435 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 HCRTR2O43614 444 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 SPNP16150 400 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF3P17036 446 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 GABRA5P31644 462 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 RPS7P62081 194 aaKnown RBP17■□□□□ 0.31
HOXA9-201ENST00000343483 PSPHP78330 225 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 KRR1Q13601 381 aaKnown RBP17■□□□□ 0.31
HOXA9-201ENST00000343483 TMPRSS11AQ6ZMR5 421 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 MARCH3Q86UD3 253 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 CYB561A3Q8NBI2 242 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 SLC37A3Q8NCC5 494 aa17■□□□□ 0.31
HOXA9-201ENST00000343483 PSD4Q8NDX1 1056 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms