RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SNTB1Q13884 538 aaKnown RBP11.84□□□□□ -0.51
TUBD1-202ENST00000340993 OR7A5Q15622 319 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 NSUN5P2Q63ZY6 315 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 HIST2H2BCQ6DN03 193 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.84□□□□□ -0.51
TUBD1-202ENST00000340993 ATG4DQ86TL0 474 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-202ENST00000340993 LIX1LQ8IVB5 337 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 BHLHE22Q8NFJ8 381 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-202ENST00000340993 ZPLD1Q8TCW7 415 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 ADAMTS16Q8TE57 1224 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 ITLN2Q8WWU7 325 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-202ENST00000340993 LZICQ8WZA0 190 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 SLC25A36Q96CQ1 311 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 SLC7A6OSQ96CW6 309 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-202ENST00000340993 ZNF559Q9BR84 538 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 ADAM19Q9H013 955 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 CLCF1Q9UBD9 225 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 CENPEQ02224 2701 aa11.84□□□□□ -0.51
TUBD1-202ENST00000340993 GJE1A6NN92 205 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 EEF1E1-BLOC1S5C9J1V9 151 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 LINC01387J3KSC0 135 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 SYT5O00445 386 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 EEF1E1O43324 174 aaKnown RBP11.83□□□□□ -0.52
TUBD1-202ENST00000340993 PLGP00747 810 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-202ENST00000340993 MT-ND1P03886 318 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 THY1P04216 161 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 HTR3AP46098 478 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 SELENOWP63302 87 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 BCL2A1Q16548 175 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 ZSWIM7Q19AV6 140 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 TMEM211Q6ICI0 200 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 MEX3DQ86XN8 651 aaKnown RBP11.83□□□□□ -0.52
TUBD1-202ENST00000340993 CCDC103Q8IW40 242 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 EID3Q8N140 333 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 CA5BP1Q8WTZ4 195 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 RASSF5Q8WWW0 418 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 DDIT4LQ96D03 193 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 KTI12Q96EK9 354 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-202ENST00000340993 TRIM2Q9C040 744 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 COQ3Q9NZJ6 369 aa11.83□□□□□ -0.52
TUBD1-202ENST00000340993 MCTS1Q9ULC4 181 aaKnown RBP11.83□□□□□ -0.52
TUBD1-202ENST00000340993 SPIN1Q9Y657 262 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-202ENST00000340993 LRRN3E7EW58 273 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 ETV2O00321 342 aaPredicted RBP11.82□□□□□ -0.52
TUBD1-202ENST00000340993 ADAMDEC1O15204 470 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 RAMP1O60894 148 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 SMNDC1O75940 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
TUBD1-202ENST00000340993 PRKD3O94806 890 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 TMIGD3P0DMS9 266 aaPredicted RBP11.82□□□□□ -0.52
TUBD1-202ENST00000340993 IMPDH2P12268 514 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 HSD17B1P14061 328 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 COL8A1P27658 744 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 SMSP52788 366 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 MS4A2Q01362 244 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 BNIP1Q12981 228 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 ZNF239Q16600 458 aaKnown RBP11.82□□□□□ -0.52
TUBD1-202ENST00000340993 PDSS1Q5T2R2 415 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 WDR88Q6ZMY6 472 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 CBLL1Q75N03 491 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 LUZP2Q86TE4 346 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 C10orf53Q8N6V4 93 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 NSMCE2Q96MF7 247 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 SEPHS2Q99611 448 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 AMBRA1Q9C0C7 1298 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 C12orf49Q9H741 205 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 SEC14L4Q9UDX3 406 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 MAGEL2Q9UJ55 1249 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 A0A0B4J2E0 115 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 A0A1B0GX12 115 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 ZNF814B7Z6K7 855 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 FAAHO00519 579 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 AKR7A3O95154 331 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 FPR1P21462 350 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 PTGER4P35408 488 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 IL1RL1Q01638 556 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 IFI44LQ53G44 452 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 VWA1Q6PCB0 445 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 GDF7Q7Z4P5 450 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 MCEMP1Q8IX19 187 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 SLC41A3Q96GZ6 507 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 BTBD10Q9BSF8 475 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 CALHM2Q9HA72 323 aa11.82□□□□□ -0.52
TUBD1-202ENST00000340993 C6orf203Q9P0P8 240 aaPredicted RBP11.82□□□□□ -0.52
TUBD1-202ENST00000340993 IGKV1D-42A0A075B6H8 117 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 MBD3L4A6NDZ8 208 aaPredicted RBP11.81□□□□□ -0.52
TUBD1-202ENST00000340993 MBD3L3A6NE82 208 aaPredicted RBP11.81□□□□□ -0.52
TUBD1-202ENST00000340993 MBD3L5A6NJ08 208 aaPredicted RBP11.81□□□□□ -0.52
TUBD1-202ENST00000340993 CD8B2A6NJW9 211 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 IFNW1P05000 195 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 C8BP07358 591 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 GRNP28799 593 aaKnown RBP11.81□□□□□ -0.52
TUBD1-202ENST00000340993 IDUAP35475 653 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 EGR4Q05215 589 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 C1orf140Q5VVS0 124 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 ULK3Q6PHR2 472 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 C6orf89Q6UWU4 347 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 TMPPEQ6ZT21 453 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 FCRLAQ7L513 359 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 ADGRE4PQ86SQ3 457 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 NKAIN4Q8IVV8 208 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms