RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 TMEM38AQ9H6F2 299 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 PLEKHF2Q9H8W4 249 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 MED4Q9NPJ6 270 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 TMEM181Q9P2C4 612 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 PRDM4Q9UKN5 801 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 TRAPPC4Q9Y296 219 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 A0A1W2PPR1 153 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 ZC3H12DA2A288 527 aaKnown RBP12.97□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF724A8MTY0 619 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 DEFB108AA8MXU0 73 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 FRS3O43559 492 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 DNPH1O43598 174 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 GCM2O75603 506 aaPredicted RBP12.97□□□□□ -0.33
ERCC1-203ENST00000340192 THBDP07204 575 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 PPP3CBP16298 524 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 CRYGSP22914 178 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 SLC6A2P23975 617 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 ARFIP2P53365 341 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 IST1P53990 364 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 SCARB2Q14108 478 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 KRT73Q86Y46 540 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 CCDC103Q8IW40 242 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 GABRG1Q8N1C3 465 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 NINJ1Q92982 152 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 ANKRD27Q96NW4 1050 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 CGREF1Q99674 301 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 ACTR6Q9GZN1 396 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 EMC3Q9P0I2 261 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 AKAP6Q13023 2319 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 ABCA4P78363 2273 aa12.97□□□□□ -0.33
ERCC1-203ENST00000340192 MAP1AP78559 2803 aaPredicted RBP12.96□□□□□ -0.33
ERCC1-203ENST00000340192 IGKV3D-15A0A087WSY6 115 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF716A6NP11 495 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF814B7Z6K7 855 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 IMPDH2P12268 514 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 PSMB1P20618 241 aaKnown RBP12.96□□□□□ -0.33
ERCC1-203ENST00000340192 EDNRAP25101 427 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 PRKAR1BP31321 381 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 OR3A2P47893 321 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 ART1P52961 327 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 MTPNP58546 118 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 SLC35A1P78382 337 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 H3F3AP84243 136 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 HOXC5Q00444 222 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 BNIP2Q12982 314 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 NFYCQ13952 458 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 SELPLGQ14242 412 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 PDK3Q15120 406 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 PAMR1Q6UXH9 720 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.96□□□□□ -0.33
ERCC1-203ENST00000340192 GALNT5Q7Z7M9 940 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 COMTD1Q86VU5 262 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 PIGXQ8TBF5 258 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 SLC35B4Q969S0 331 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 PIK3IP1Q96FE7 263 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 SPATA5L1Q9BVQ7 753 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 CCDC134Q9H6E4 229 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 CCM2LQ9NUG4 571 aaPredicted RBP12.96□□□□□ -0.33
ERCC1-203ENST00000340192 PRSS50Q9UI38 385 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 EDARQ9UNE0 448 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 PLEKHA6Q9Y2H5 1048 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 GPR52Q9Y2T5 361 aa12.96□□□□□ -0.33
ERCC1-203ENST00000340192 FBP2O00757 339 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 TPST1O60507 370 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 EIF1BO60739 113 aaKnown RBP12.95□□□□□ -0.34
ERCC1-203ENST00000340192 RAMP1O60894 148 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 ADAP00813 363 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 FPR1P21462 350 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 DNASE1P24855 282 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 AQP1P29972 269 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 CAPRIN1Q14444 709 aaKnown RBP12.95□□□□□ -0.34
ERCC1-203ENST00000340192 TSC22D1Q15714 1073 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 CYP51A1Q16850 503 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 SFRP5Q5T4F7 317 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 DHRS4L2Q6PKH6 230 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 Q6ZT83 130 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 PTOV1Q86YD1 416 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 HIPK4Q8NE63 616 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 STEAP2Q8NFT2 490 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 C3orf49Q96BT1 292 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 S100PBPQ96BU1 408 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 ZNF607Q96SK3 696 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 HDHD5Q9BXW7 423 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 POTEKPQ9BYX7 375 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 OR10A4Q9H209 315 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 ANGPT4Q9Y264 503 aa12.95□□□□□ -0.34
ERCC1-203ENST00000340192 LIPT2A6NK58 231 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 A8MVM7 634 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 GPR171O14626 319 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 RAF1P04049 648 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 GPIP06744 558 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 IL32P24001 234 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 IDUAP35475 653 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 MDH1P40925 334 aaKnown RBP12.94□□□□□ -0.34
ERCC1-203ENST00000340192 SLC16A1P53985 500 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 CEACAM7Q14002 265 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 P2RY6Q15077 328 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 OR7A5Q15622 319 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 GLIPR1L2Q4G1C9 344 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 SPNS3Q6ZMD2 512 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms