RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 NMNAT3Q96T66 252 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 TEAD3Q99594 435 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 MND1Q9BWT6 205 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 TGIF2Q9GZN2 237 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 C14orf105Q9NVL8 296 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 MRPS18AQ9NVS2 196 aaKnown RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SRPK3Q9UPE1 567 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SIRT4Q9Y6E7 314 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 R4GN57 208 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 RCBTB2O95199 551 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 GUSBP08236 651 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 CLEC2LP0C7M8 214 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SP9P0CG40 484 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 BMP4P12644 408 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 RPS19P39019 145 aaKnown RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC1A3P43003 542 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 RPS5P46782 204 aaKnown RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 EMP2P54851 167 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 RPS7P62081 194 aaKnown RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 RPS25P62851 125 aaKnown RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 PAPD4Q6PIY7 484 aaKnown RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 RTL4Q6ZR62 310 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SSX6Q7RTT6 188 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 RABEPKQ7Z6M1 372 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ADCK1Q86TW2 530 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 C10orf53Q8N6V4 93 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 BMPERQ8N8U9 685 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF563Q8TA94 476 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 C9orf43Q8TAL5 461 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 NAT6Q93015 286 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SH3GL3Q99963 347 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 BARHL1Q9BZE3 327 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 C6orf62Q9GZU0 229 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 FGF20Q9NP95 211 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 CMC2Q9NRP2 79 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 H2AFY2Q9P0M6 372 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC35A3Q9Y2D2 325 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 LNP1A1A4G5 178 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ELOA3DA6NLF2 546 aaPredicted RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 C12orf71A8MTZ7 269 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 SHISA8B8ZZ34 492 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 E9PI62 339 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 J3QRE1 110 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 NTN3O00634 580 aaPredicted RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 CTDSP2O14595 271 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 HCN1O60741 890 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 HMGN1P05114 100 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 MYL12AP19105 171 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 CELP19835 753 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 HTR1FP30939 366 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 RPL4P36578 427 aaKnown RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 PSMD4P55036 377 aaKnown RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 CAV3P56539 151 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 WNT4P56705 351 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 FOXK1P85037 733 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 BIKQ13323 160 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 C11orf91Q3C1V1 193 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF829Q3KNS6 432 aaPredicted RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ELOA3BQ3SY89 546 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 KLHL22Q53GT1 634 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 C3orf38Q5JPI3 329 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 WBP2NLQ6ICG8 309 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 RPTNQ6XPR3 784 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 CMIPQ8IY22 773 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF527Q8NB42 609 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ELOA3Q8NG57 546 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 CEP76Q8TAP6 659 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 DNAJA4Q8WW22 397 aaPredicted RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 SPRYD4Q8WW59 207 aaPredicted RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 TAAR8Q969N4 342 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ZMYND19Q96E35 227 aaPredicted RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 SGTBQ96EQ0 304 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 KCNS3Q9BQ31 491 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 CRB3Q9BUF7 120 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 TBL1XR1Q9BZK7 514 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 OR11A1Q9GZK7 315 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 KRCC1Q9NPI7 259 aaPredicted RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ERVK13-1Q9NX77 482 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 CHRNA9Q9UGM1 479 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ICAM5Q9UMF0 924 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 PCNX2A6NKB5 2137 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 EML6Q6ZMW3 1958 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 TRBV11-1A0A0K0K1C0 115 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC35F4A4IF30 521 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 OR6C68A6NDL8 312 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 CCDC182A6NF36 153 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 VSTM2BA6NLU5 285 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 PRR23D1E9PI22 279 aaPredicted RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 H7C1C5 153 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 PRR23D2P0DMB1 279 aaPredicted RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 PEPDP12955 493 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 EVI2BP34910 448 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 MPLP40238 635 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ADH7P40394 386 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 RBM34P42696 430 aaKnown RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 LCN6P62502 163 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 MADCAM1Q13477 382 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ANGPT1Q15389 498 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 DGUOKQ16854 277 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 VASNQ6EMK4 673 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms