RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 RAET1LQ5VY80 246 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 POMZP3Q6PJE2 187 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 Q6ZS92 163 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 GTPBP3Q969Y2 492 aaKnown RBP13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 FAM46AQ96IP4 442 aaKnown RBP13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 NIPSNAP1Q9BPW8 284 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 GABARAPL3Q9BY60 117 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 CSAG2Q9Y5P2 127 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 MED12Q93074 2177 aa13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 TLN1Q9Y490 2541 aaKnown RBP13.15□□□□□ -0.31
NIPAL3-202ENST00000339255 TRAV36DV7A0A075B6V5 113 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 GJE1A6NN92 205 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 ENO4A6NNW6 628 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 KLF4O43474 513 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 OR2T1O43869 369 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 MT-ATP6P00846 226 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 RFPL3SP0C7P2 107 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 GPR4P46093 362 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 CD97P48960 835 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 ESRRGP62508 458 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 EGR4Q05215 589 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 SYT14P1Q58G82 188 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 FAM69AQ5T7M9 428 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 RPL13AP3Q6NVV1 102 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 KLHL17Q6TDP4 642 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 FAM109AQ8N4B1 249 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 FAM83FQ8NEG4 500 aaPredicted RBP13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 OR6S1Q8NH40 331 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 PFN4Q8NHR9 129 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 POC1BQ8TC44 478 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 SGTBQ96EQ0 304 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 ABHD17AQ96GS6 310 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 B3GNT3Q9Y2A9 372 aa13.14□□□□□ -0.31
NIPAL3-202ENST00000339255 PKD1L2Q7Z442 2459 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 TMEM72A0PK05 275 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 OR2M5A3KFT3 312 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 EFCAB9A8MZ26 197 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 DLGAP1O14490 977 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 PIP5K1CO60331 668 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 TRAPPC6AO75865 159 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 AHSA1O95433 338 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 SAGP10523 405 aaPredicted RBP13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 POU2F1P14859 743 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 SLC9A3P48764 834 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 LSM11P83369 360 aaKnown RBP eCLIP13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 ALDH6A1Q02252 535 aaKnown RBP13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 MFSD13AQ14CX5 517 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 ANKDD1AQ495B1 522 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 WLSQ5T9L3 541 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 C1orf140Q5VVS0 124 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 GALNT5Q7Z7M9 940 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 SLC43A2Q8N370 569 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 CLDN22Q8N7P3 220 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 POTEKPQ9BYX7 375 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 TOR3AQ9H497 397 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 Q9H521 79 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 C20orf141Q9NUB4 165 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 KIAA1549Q9HCM3 1950 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 SPTA1P02549 2419 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 PIEZO2Q9H5I5 2752 aa13.13□□□□□ -0.31
NIPAL3-202ENST00000339255 H0YAE9 185 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 SNAP29O95721 258 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 OSMP13725 252 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 CCNA2P20248 432 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 CHMP24386 653 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 PPIAP62937 165 aaKnown RBP13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 IL1RL1Q01638 556 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 NHSL2Q5HYW2 709 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 RASSF6Q6ZTQ3 369 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ASB18Q6ZVZ8 466 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 DHRSXQ8N5I4 330 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 TMEM251Q8N6I4 163 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ZNF555Q8NEP9 628 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 C9orf43Q8TAL5 461 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 SFXN2Q96NB2 322 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ARHGAP9Q9BRR9 750 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ADI1Q9BV57 179 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 FKRPQ9H9S5 495 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ACKR4Q9NPB9 350 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 NANSQ9NR45 359 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ZNF229Q9UJW7 825 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 RAB26Q9ULW5 256 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 RPH3AQ9Y2J0 694 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 UNC119BA6NIH7 251 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 FAM166BA8MTA8 275 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 HCN1O60741 890 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 OR7A10O76100 309 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 PDGFAP04085 211 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ZNF24P17028 368 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 MAKP20794 623 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 PTNP21246 168 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 TCEA1P23193 301 aaKnown RBP13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 RFC3P40938 356 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 MAGEA5P43359 124 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 NUP107P57740 925 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 B3GALT5-AS1P59052 145 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 RAC1P63000 192 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms