RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 SORCS2Q96PQ0 1159 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 KCNC2Q96PR1 638 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 BBS4Q96RK4 519 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 COPS8Q99627 209 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SLC6A7Q99884 636 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SMR3AQ99954 134 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 BTBD10Q9BSF8 475 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 KIFC1Q9BW19 673 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF717Q9BY31 904 aaPredicted RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 TBL1XR1Q9BZK7 514 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CD244Q9BZW8 370 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 NXF2Q9GZY0 626 aaKnown RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 PPCSQ9HAB8 311 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SMYD2Q9NRG4 433 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 NPAP1Q9NZP6 1156 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 EXTL2Q9UBQ6 330 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CTSFQ9UBX1 484 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 PURGQ9UJV8 347 aaKnown RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 DAPP1Q9UN19 280 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 GINS2Q9Y248 185 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF256Q9Y2P7 627 aaPredicted RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CACNA1CQ13936 2221 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 STAB2Q8WWQ8 2551 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 A0A087X0T9 212 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 ANKRD34BA5PLL1 514 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 FAM90A10PA6NDY2 464 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 C17orf98A8MV24 154 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 E5RJQ4 531 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 H0YAE9 185 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 M0QYV0 167 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 NEMP1O14524 444 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CBFA2T2O43439 604 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 LDB2O43679 373 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 IGLV2-8P01709 118 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 APOA4P06727 396 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 C8orf88P0DMB2 117 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 NFKB1P19838 968 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 GSTT1P30711 240 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SSTR4P31391 388 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SYKP43405 635 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CLDN15P56746 228 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SESN2P58004 480 aaPredicted RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 KIAA0141Q14154 515 aaPredicted RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 STX1AQ16623 288 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CYP1B1Q16678 543 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 PHKG1Q16816 387 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 GLE1Q53GS7 698 aaKnown RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SPDYAQ5MJ70 313 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 TEX35Q5T0J7 233 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SDHAF4Q5VUM1 108 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 KCTD16Q68DU8 428 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 NCBP2-AS2Q69YL0 99 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 PYHIN1Q6K0P9 492 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 RFWD3Q6PCD5 774 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 FBXW12Q6X9E4 464 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 HACD2Q6Y1H2 254 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CEP128Q6ZU80 1094 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF554Q86TJ5 538 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 IFNEQ86WN2 208 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 C9orf40Q8IXQ3 194 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 OSR2Q8N2R0 312 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 KIF2BQ8N4N8 673 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 Q8N6K4 173 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 OR4M1Q8NGD0 313 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SVIPQ8NHG7 77 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SLC2A12Q8TD20 617 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 PPWD1Q96BP3 646 aaKnown RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 MFSD3Q96ES6 412 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 MS4A14Q96JA4 679 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 VSTM2LQ96N03 204 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 LRRC37BQ96QE4 947 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CPXM1Q96SM3 734 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 AIF1LQ9BQI0 150 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SLC19A3Q9BZV2 496 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 REEP4Q9H6H4 257 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 UBTD1Q9HAC8 227 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 EXOC1Q9NV70 894 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 DNAJC11Q9NVH1 559 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CISD1Q9NZ45 108 aaKnown RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SH3BP4Q9P0V3 963 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SIRPGQ9P1W8 387 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 FAF1Q9UNN5 650 aaPredicted RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 PKIGQ9Y2B9 76 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 DSCAMO60469 2012 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 CELSR2Q9HCU4 2923 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 PCNTO95613 3336 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 DMXL2Q8TDJ6 3036 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 TRBV5-3A0A0A0MS03 114 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 A0A1W2PPH5 198 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 RBMY1BA6NDE4 496 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 RBMY1EA6NEQ0 496 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 DHRS7CA6NNS2 312 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 C17orf100A8MU93 164 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 UBFD1O14562 309 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 KLF11O14901 512 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 CDC40O60508 579 aaKnown RBP eCLIP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 LDB3O75112 727 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 NPIPB7O75200 414 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF432O94892 652 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms