RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SUZ12Q15022 739 aaKnown RBP11.34□□□□□ -0.59
VPS33B-201ENST00000333371 NNATQ16517 81 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 TMEM255AQ5JRV8 349 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 ZBTB37Q5TC79 503 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 STPG1Q5TH74 334 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 SFRP4Q6FHJ7 346 aaPredicted RBP11.34□□□□□ -0.59
VPS33B-201ENST00000333371 ZNF767PQ75MW2 155 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 TOR1AIP2Q8NFQ8 470 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 ZPLD1Q8TCW7 415 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 GIMAP1Q8WWP7 306 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 KCTD12Q96CX2 325 aaKnown RBP11.34□□□□□ -0.59
VPS33B-201ENST00000333371 OR2M4Q96R27 311 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 SERINC2Q96SA4 455 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 CLEC1BQ9P126 229 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 OR2W5A6NFC9 320 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 PRKNO60260 465 aaPredicted RBP11.34□□□□□ -0.59
VPS33B-201ENST00000333371 AGR2O95994 175 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 EGFP01133 1207 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 HPXP02790 462 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 SMIM10L1P0DMW3 83 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 EPXP11678 715 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 UGT2B7P16662 529 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 TLX1P31314 330 aaPredicted RBP11.34□□□□□ -0.59
VPS33B-201ENST00000333371 GDI2P50395 445 aaKnown RBP11.34□□□□□ -0.59
VPS33B-201ENST00000333371 PER3P56645 1201 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 PPP1CAP62136 330 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 ZNF761Q86XN6 746 aaPredicted RBP11.34□□□□□ -0.59
VPS33B-201ENST00000333371 GPALPP1Q8IXQ4 340 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 RNF113BQ8IZP6 322 aaKnown RBP11.34□□□□□ -0.59
VPS33B-201ENST00000333371 FRMD1Q8N878 549 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 FAM98AQ8NCA5 519 aaKnown RBP11.34□□□□□ -0.59
VPS33B-201ENST00000333371 LGALS14Q8TCE9 139 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 TM4SF19Q96DZ7 209 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 SMIM10Q96HG1 83 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 MAP6Q96JE9 813 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 S1PR5Q9H228 398 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 EVA1BQ9NVM1 165 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 PHF11Q9UIL8 331 aa11.34□□□□□ -0.59
VPS33B-201ENST00000333371 CIB4A0PJX0 185 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 OR6C74A6NCV1 312 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 ANKRD61A6NGH8 418 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 HRKO00198 91 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 GMDSO60547 372 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 COL9A1P20849 921 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 CTHP32929 405 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 NRG3P56975 720 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 VSX2P58304 361 aaPredicted RBP11.33□□□□□ -0.59
VPS33B-201ENST00000333371 RPS11P62280 158 aaKnown RBP eCLIP11.33□□□□□ -0.59
VPS33B-201ENST00000333371 FGFBP1Q14512 234 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 POU4F3Q15319 338 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 ZSWIM7Q19AV6 140 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 HES5Q5TA89 166 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 FIGLAQ6QHK4 219 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 TPRA1Q86W33 373 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 FAM3CQ92520 227 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 SIPA1Q96FS4 1042 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 GPR137Q96N19 417 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 GABRG3Q99928 467 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 DPCDQ9BVM2 203 aaPredicted RBP11.33□□□□□ -0.59
VPS33B-201ENST00000333371 FBRSQ9HAH7 460 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 GNG8Q9UK08 70 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 PILRAQ9UKJ1 303 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 ING4Q9UNL4 249 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 COPS3Q9UNS2 423 aa11.33□□□□□ -0.59
VPS33B-201ENST00000333371 ACOD1A6NK06 481 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 MCIDASD6RGH6 385 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 H0YGG7 62 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 H3BSH0 61 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 SELENOFO60613 162 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 HOXD11P31277 338 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-201ENST00000333371 ARF3P61204 181 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-201ENST00000333371 GSG1Q2KHT4 349 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 PRICKLE4Q2TBC4 344 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 TEX261Q6UWH6 196 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF680Q8NEM1 530 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 NT5CQ8TCD5 201 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 HEXA-AS1Q9H8Q6 139 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 FKRPQ9H9S5 495 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 IER3IP1Q9Y5U9 82 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 U3KQ87 197 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 SEC16AO15027 2179 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 A0A0B4J2E0 115 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 A0A1B0GX12 115 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 TRABD2BA6NFA1 517 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF593O00488 134 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-201ENST00000333371 KCNJ13O60928 360 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 RASGRP1O95267 797 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 IGKV1D-16P01601 117 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 ANXA3P12429 323 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 POU6F2P78424 691 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-201ENST00000333371 MGAT2Q10469 447 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 ALG10BQ5I7T1 473 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 FAAP20Q6NZ36 180 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 KIAA1324Q6UXG2 1013 aaKnown RBP11.33□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF671Q8TAW3 534 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.33□□□□□ -0.6
VPS33B-201ENST00000333371 TMEM27Q9HBJ8 222 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 POT1Q9NUX5 634 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 STMN3Q9NZ72 180 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 COQ3Q9NZJ6 369 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms