RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 TNFRSF10DQ9UBN6 386 aa16.31■□□□□ 0.2
ACTB-201ENST00000331789 GPN3Q9UHW5 284 aaPredicted RBP16.31■□□□□ 0.2
ACTB-201ENST00000331789 FBXL4Q9UKA2 621 aa16.31■□□□□ 0.2
ACTB-201ENST00000331789 R4GN57 208 aa16.31■□□□□ 0.2
ACTB-201ENST00000331789 CCDC182A6NF36 153 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 ADAM10O14672 748 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 RPL4P36578 427 aaKnown RBP16.3■□□□□ 0.2
ACTB-201ENST00000331789 SLC26A5P58743 744 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 LTBQ06643 244 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 ZNF74Q16587 644 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 POMZP3Q6PJE2 187 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 PHC2Q8IXK0 858 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 SLC43A2Q8N370 569 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 OR52E2Q8NGJ4 325 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 OR4K13Q8NH42 304 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 OR5W2Q8NH69 310 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 MOSPD2Q8NHP6 518 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 DUSP19Q8WTR2 217 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 TM9SF4Q92544 642 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 KTI12Q96EK9 354 aaPredicted RBP16.3■□□□□ 0.2
ACTB-201ENST00000331789 SECISBP2Q96T21 854 aaKnown RBP16.3■□□□□ 0.2
ACTB-201ENST00000331789 SLIRPQ9GZT3 109 aaKnown RBP16.3■□□□□ 0.2
ACTB-201ENST00000331789 SLC39A1Q9NY26 324 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 ADAM18Q9Y3Q7 739 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 PCDHGB2Q9Y5G2 931 aa16.3■□□□□ 0.2
ACTB-201ENST00000331789 SPIN1Q9Y657 262 aaPredicted RBP16.3■□□□□ 0.2
ACTB-201ENST00000331789 A0A1B0GVG6 124 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 C2orf72A6NCS6 295 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 J3QRE1 110 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 IGHA1P01876 353 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 KLK3P07288 261 aaPredicted RBP16.29■□□□□ 0.2
ACTB-201ENST00000331789 HIST1H1CP16403 213 aaKnown RBP16.29■□□□□ 0.2
ACTB-201ENST00000331789 ZNF3P17036 446 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 OPRL1P41146 370 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 SERPINB10P48595 397 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 RPS7P62081 194 aaKnown RBP16.29■□□□□ 0.2
ACTB-201ENST00000331789 CCDC157Q569K6 752 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 ARHGAP11AQ6P4F7 1023 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 SLC15A4Q8N697 577 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 TEAD3Q99594 435 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 ULBP3Q9BZM4 244 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 NDUFB11Q9NX14 153 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 ERVK13-1Q9NX77 482 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 C19orf25Q9UFG5 118 aaPredicted RBP16.29■□□□□ 0.2
ACTB-201ENST00000331789 PNMA8CA0A1B0GUJ8 204 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 GYPBP06028 91 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 ENDOUP21128 410 aaKnown RBP16.29■□□□□ 0.2
ACTB-201ENST00000331789 SLC2A5P22732 501 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 CRYBB2P43320 205 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 SLC16A1P53985 500 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 TUBA1BP68363 451 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 PSPHP78330 225 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 EFR3AQ14156 821 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 PLA2G2CQ5R387 149 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 DPY19L2P2Q6ZN68 376 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 TUBA1AQ71U36 451 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 TMEM99Q8N816 258 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 FAM98AQ8NCA5 519 aaKnown RBP16.29■□□□□ 0.2
ACTB-201ENST00000331789 ZNF485Q8NCK3 441 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 SDR9C7Q8NEX9 313 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 LOXL4Q96JB6 756 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 OCEL1Q9H607 264 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 WDR54Q9H977 334 aa16.29■□□□□ 0.2
ACTB-201ENST00000331789 EXOSC4Q9NPD3 245 aaKnown RBP16.29■□□□□ 0.2
ACTB-201ENST00000331789 FRYLO94915 3013 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 BLOC1S5-TXNDC5H3BN57 136 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 FLRT2O43155 660 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 IFNGP01579 166 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 GP1BBP13224 206 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 CPEP16870 476 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 PGCP20142 388 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 AQP2P41181 271 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 P2RX1P51575 399 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 RPS4XP62701 263 aaKnown RBP16.28■□□□□ 0.2
ACTB-201ENST00000331789 ERVK-25P63136 954 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 CBFBQ13951 182 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 ZNF791Q3KP31 576 aaPredicted RBP16.28■□□□□ 0.2
ACTB-201ENST00000331789 TIMM50Q3ZCQ8 353 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 OR5M10Q6IEU7 315 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 FAM198BQ6UWH4 519 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 PSD4Q8NDX1 1056 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 KBTBD8Q8NFY9 601 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 B4GALNT2Q8NHY0 566 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 GPR119Q8TDV5 335 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 HGDQ93099 445 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 DNAJA3Q96EY1 480 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 TRMT61AQ96FX7 289 aaKnown RBP16.28■□□□□ 0.2
ACTB-201ENST00000331789 ARHGAP9Q9BRR9 750 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 C12orf10Q9HB07 376 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 MMP25Q9NPA2 562 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 KLHL1Q9NR64 748 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 PCDHGA5Q9Y5G8 931 aa16.28■□□□□ 0.2
ACTB-201ENST00000331789 LRRTM2O43300 516 aa16.27■□□□□ 0.2
ACTB-201ENST00000331789 CDC40O60508 579 aaKnown RBP eCLIP16.27■□□□□ 0.29e-7■■■□□ 18.5
ACTB-201ENST00000331789 LALBAP00709 142 aa16.27■□□□□ 0.2
ACTB-201ENST00000331789 IGF2P01344 180 aa16.27■□□□□ 0.2
ACTB-201ENST00000331789 TSPAN19P0C672 248 aa16.27■□□□□ 0.2
ACTB-201ENST00000331789 PAICSP22234 425 aaKnown RBP16.27■□□□□ 0.2
ACTB-201ENST00000331789 CXCR1P25024 350 aa16.27■□□□□ 0.2
ACTB-201ENST00000331789 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms