RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ZFP62Q8NB50 900 aaPredicted RBP9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 SGTBQ96EQ0 304 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 TTTY12Q9BZ98 90 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 REV1Q9UBZ9 1251 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 LRRC42Q9Y546 428 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 SPIN1Q9Y657 262 aaPredicted RBP9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 TRAV36DV7A0A075B6V5 113 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 UNC119BA6NIH7 251 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 EFCAB9A8MZ26 197 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 NPIPB7O75200 414 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 OSMP13725 252 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 CCNA2P20248 432 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 GDF1P27539 372 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 CXADRP78310 365 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 ALDH6A1Q02252 535 aaKnown RBP9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 SELENBP1Q13228 472 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 WLSQ5T9L3 541 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 C3orf33Q6P1S2 294 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 RASSF6Q6ZTQ3 369 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 DHRSXQ8N5I4 330 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 KTI12Q96EK9 354 aaPredicted RBP9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 RIBC2Q9H4K1 309 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 SERINC1Q9NRX5 453 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 AP4B1Q9Y6B7 739 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 H0YAE9 185 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 TCEA1P23193 301 aaKnown RBP9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 CAPGP40121 348 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 CD97P48960 835 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 ESRRGP62508 458 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 ADARB1P78563 741 aaKnown RBP9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 PLGLB1Q02325 96 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 C6orf52Q5T4I8 152 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 C1orf140Q5VVS0 124 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 RAET1LQ5VY80 246 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC46A3Q7Z3Q1 461 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 FAM83FQ8NEG4 500 aaPredicted RBP9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC25A43Q8WUT9 341 aaPredicted RBP9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 CYGBQ8WWM9 190 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 TFAP2CQ92754 450 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 DDIT4LQ96D03 193 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 PIGQQ9BRB3 760 aa9.26□□□□□ -0.93
VIPAS39-201ENST00000327028 CACNA1GO43497 2377 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 ZC3H12DA2A288 527 aaKnown RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 OR2M5A3KFT3 312 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 E9PQ18 207 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 CDC42EP2O14613 210 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 OR7A10O76100 309 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 TP53P04637 393 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 HPNP05981 417 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 IL11P20809 199 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 FKBP2P26885 142 aaKnown RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 B3GALT5-AS1P59052 145 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 FOXK1P85037 733 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 NPRL3Q12980 569 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 TOMM20Q15388 145 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF74Q16587 644 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC36A3Q495N2 470 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF620Q6ZNG0 422 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 TMEM251Q8N6I4 163 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 CLDN22Q8N7P3 220 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 FAM98AQ8NCA5 519 aaKnown RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF555Q8NEP9 628 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 OR5M1Q8NGP8 315 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 OR6S1Q8NH40 331 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 OR14L1PQ8NHC6 308 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 EXTL1Q92935 676 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 UBL7Q96S82 380 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 PTDSS2Q9BVG9 487 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 GRIP2Q9C0E4 1043 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 Q9H521 79 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 FAM118AQ9NWS6 357 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 QPCTLQ9NXS2 382 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 RPH3AQ9Y2J0 694 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 CDH10Q9Y6N8 788 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 DMXL2Q8TDJ6 3036 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 ACOT7O00154 380 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 EFNA2O43921 213 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 AHSA1O95433 338 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 CH25HO95992 272 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 PDGFAP04085 211 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 SAGP10523 405 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 ACADSP16219 412 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 RFC3P40938 356 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC9A3P48764 834 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF169Q14929 603 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 TTC23Q5W5X9 447 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 YRDCQ86U90 279 aaKnown RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC22A16Q86VW1 577 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 KIF18BQ86Y91 864 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 OR13C2Q8NGS9 318 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 LIPHQ8WWY8 451 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 TAAR8Q969N4 342 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 PITX2Q99697 317 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 POTEKPQ9BYX7 375 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 OR11A1Q9GZK7 315 aa9.25□□□□□ -0.93
VIPAS39-201ENST00000327028 FAM166BA8MTA8 275 aa9.24□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC16A6O15403 523 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms