RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 M0R233 179 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 NARSO43776 548 aaKnown RBP17.59■□□□□ 0.41
RTN4-201ENST00000317610 AK1P00568 194 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 ADRB1P08588 477 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 MAP3K8P41279 467 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 HCCSP53701 268 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 TAGLNQ01995 201 aaKnown RBP17.59■□□□□ 0.41
RTN4-201ENST00000317610 METTL11BQ5VVY1 283 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 ZCCHC12Q6PEW1 402 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 ARL14Q8N4G2 192 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 CNN2Q99439 309 aaKnown RBP17.59■□□□□ 0.41
RTN4-201ENST00000317610 BEX1Q9HBH7 125 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 ANKRD10Q9NXR5 420 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 USP36Q9P275 1121 aaKnown RBP17.59■□□□□ 0.41
RTN4-201ENST00000317610 CHRNA9Q9UGM1 479 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 FLVCR2Q9UPI3 526 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 RCE1Q9Y256 329 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 GABARAPH6UMI1 98 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 MAGEB4O15481 346 aaPredicted RBP17.59■□□□□ 0.41
RTN4-201ENST00000317610 TMEM127O75204 238 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 MAT2AP31153 395 aaKnown RBP17.59■□□□□ 0.41
RTN4-201ENST00000317610 TLX1P31314 330 aaPredicted RBP17.59■□□□□ 0.41
RTN4-201ENST00000317610 RBM34P42696 430 aaKnown RBP17.59■□□□□ 0.41
RTN4-201ENST00000317610 CST6Q15828 149 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 TMEM255AQ5JRV8 349 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 GPAT4Q86UL3 456 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 CACUL1Q86Y37 369 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 RPS4Y2Q8TD47 263 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 ZMYND19Q96E35 227 aaPredicted RBP17.59■□□□□ 0.41
RTN4-201ENST00000317610 MSANTD3Q96H12 275 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 GFI1Q99684 422 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 TTTY10Q9BZA0 68 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 FLRT3Q9NZU0 649 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 SERGEFQ9UGK8 458 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 KIF25Q9UIL4 384 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 MOSPD1Q9UJG1 213 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 FBXL3Q9UKT7 428 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 HEBP2Q9Y5Z4 205 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 SLC22A7Q9Y694 548 aa17.59■□□□□ 0.41
RTN4-201ENST00000317610 BRINP1O60477 761 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 FKTNO75072 461 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 DNAJB6O75190 326 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 SLC35G6P0C7Q6 338 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 SOX9P48436 509 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 ZSWIM7Q19AV6 140 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 SFRP4Q6FHJ7 346 aaPredicted RBP17.58■□□□□ 0.41
RTN4-201ENST00000317610 SLC35F2Q8IXU6 374 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 SPICQ8N5J4 248 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 WBP1Q96G27 269 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 DERL3Q96Q80 235 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 RNF208Q9H0X6 261 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 NKIRAS2Q9NYR9 191 aa17.58■□□□□ 0.41
RTN4-201ENST00000317610 A0A1W2PPL8 197 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 ZNF879B4DU55 563 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 GPRIN2O60269 458 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 TIMP1P01033 207 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 POU2F2P09086 479 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 AP3S2P59780 193 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 BAMBIQ13145 260 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 FBXO42Q6P3S6 717 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 NUDT18Q6ZVK8 323 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 LINGO2Q7L985 606 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 OR6V1Q8N148 313 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 OR52E2Q8NGJ4 325 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 SPPL3Q8TCT6 385 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 GRHL3Q8TE85 626 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 ZNF296Q8WUU4 475 aaPredicted RBP17.58■□□□□ 0.4
RTN4-201ENST00000317610 PCNPQ8WW12 178 aaKnown RBP17.58■□□□□ 0.4
RTN4-201ENST00000317610 SLC25A38Q96DW6 304 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 RBCK1Q9BYM8 510 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 POLE3Q9NRF9 147 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 PIPOXQ9P0Z9 390 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 COLEC10Q9Y6Z7 277 aa17.58■□□□□ 0.4
RTN4-201ENST00000317610 TRBV2A0A0J9YWF9 115 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 A0A1B0GWA3 101 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 PIN1P1O15428 100 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 B3GALT2O43825 422 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 NGFRP08138 427 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 CPN1P15169 458 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 DPP4P27487 766 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 VEGFCP49767 419 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 TCTE1Q5JU00 501 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 OLFML2AQ68BL7 652 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 OR4E2Q8NGC2 313 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 OR52I2Q8NH67 350 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 OR14A16Q8NHC5 309 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 DDOQ99489 341 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 RSPH9Q9H1X1 276 aaPredicted RBP17.57■□□□□ 0.4
RTN4-201ENST00000317610 CDCP1Q9H5V8 836 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 TMEM74BQ9NUR3 256 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 ZNF224Q9NZL3 707 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 PCDH10Q9P2E7 1040 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 KLHL9Q9P2J3 617 aa17.57■□□□□ 0.4
RTN4-201ENST00000317610 IFITM5A6NNB3 132 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 AIPO00170 330 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 P2RX6O15547 441 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 SULT1B1O43704 296 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 TOXO94900 526 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 SRMP19623 302 aa17.56■□□□□ 0.4
RTN4-201ENST00000317610 C4BPBP20851 252 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms