RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TIMM23BQ5SRD1 257 aa15.71■□□□□ 0.11
TPM1-203ENST00000317516 POM121Q96HA1 1249 aa15.71■□□□□ 0.11
TPM1-203ENST00000317516 Q96MF0 132 aa15.71■□□□□ 0.11
TPM1-203ENST00000317516 RAD21L1Q9H4I0 556 aa15.71■□□□□ 0.11
TPM1-203ENST00000317516 PARPBPQ9NWS1 579 aa15.71■□□□□ 0.11
TPM1-203ENST00000317516 USH1CQ9Y6N9 552 aa15.71■□□□□ 0.11
TPM1-203ENST00000317516 FLNAP21333 2647 aaKnown RBP15.71■□□□□ 0.11
TPM1-203ENST00000317516 ROS1P08922 2347 aa15.71■□□□□ 0.1
TPM1-203ENST00000317516 ARID1AO14497 2285 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 NF1P21359 2839 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 A0A0G2JPF8 293 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 CIB4A0PJX0 185 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 FAM234BA2RU67 622 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 CDHR4A6H8M9 788 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 ZNF716A6NP11 495 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 HNRNPCL2B2RXH8 293 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 HNRNPCL3B7ZW38 293 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 HNRNPCL1O60812 293 aaKnown RBP15.7■□□□□ 0.1
TPM1-203ENST00000317516 TFPTP0C1Z6 253 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 HNRNPCL4P0DMR1 293 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 ETFAP13804 333 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 IGHV1-2P23083 117 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 CXCR1P25024 350 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 PLAURQ03405 335 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 EPGNQ6UW88 154 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 CLEC9AQ6UXN8 241 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 MAVSQ7Z434 540 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 LRRC8CQ8TDW0 803 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 SLC38A5Q8WUX1 472 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 IGFBPL1Q8WX77 278 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 FBXW5Q969U6 566 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 DNAJA3Q96EY1 480 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 C7orf26Q96N11 449 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 ADAM19Q9H013 955 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 SLC6A13Q9NSD5 602 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 ZNF701Q9NV72 531 aaPredicted RBP15.7■□□□□ 0.1
TPM1-203ENST00000317516 ASB6Q9NWX5 421 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 LAMP3Q9UQV4 416 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 IFT52Q9Y366 437 aa15.7■□□□□ 0.1
TPM1-203ENST00000317516 ZFHX3Q15911 3703 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 TMEM72A0PK05 275 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 OR5H1A6NKK0 313 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 CCT8L1PA6NM43 557 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 POLR3GO15318 223 aaPredicted RBP15.69■□□□□ 0.1
TPM1-203ENST00000317516 PGM3O95394 542 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 BCHEP06276 602 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 THBS1P07996 1170 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 COX5AP20674 150 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 MVDP53602 400 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 ATP5J2P56134 94 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 RPS4XP62701 263 aaKnown RBP15.69■□□□□ 0.1
TPM1-203ENST00000317516 H3F3AP84243 136 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.69■□□□□ 0.1
TPM1-203ENST00000317516 CCDC103Q8IW40 242 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 ZNF433Q8N7K0 673 aaPredicted RBP15.69■□□□□ 0.1
TPM1-203ENST00000317516 VPS33AQ96AX1 596 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 TRMT61AQ96FX7 289 aaKnown RBP15.69■□□□□ 0.1
TPM1-203ENST00000317516 RLIMQ9NVW2 624 aa15.69■□□□□ 0.1
TPM1-203ENST00000317516 DSPPQ9NZW4 1301 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 HEATR5AQ86XA9 2040 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 H7C1Q1 480 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 IGHV3-9P01782 118 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 GPIP06744 558 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 LTBQ06643 244 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 BSPH1Q075Z2 132 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 MAPK11Q15759 364 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 ZNF672Q499Z4 452 aaPredicted RBP15.68■□□□□ 0.1
TPM1-203ENST00000317516 RNF220Q5VTB9 566 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 WBP2NLQ6ICG8 309 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 OR7E24Q6IFN5 339 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 PAQR6Q6TCH4 344 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 VRK2Q86Y07 508 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 OR9I1Q8NGQ6 314 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 SMAP2Q8WU79 429 aaPredicted RBP15.68■□□□□ 0.1
TPM1-203ENST00000317516 GTF2H4Q92759 462 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 RADILQ96JH8 1075 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 COX4I2Q96KJ9 171 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 SMR3AQ99954 134 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 TCF7L2Q9NQB0 619 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 TAS2R16Q9NYV7 291 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 UPB1Q9UBR1 384 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 SLC9A8Q9Y2E8 581 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 PCDHB14Q9Y5E9 798 aa15.68■□□□□ 0.1
TPM1-203ENST00000317516 DPRXA6NFQ7 191 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 CLIC1O00299 241 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 GKN3PP0CG01 181 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 IMPDH2P12268 514 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 NCF2P19878 526 aaPredicted RBP15.67■□□□□ 0.1
TPM1-203ENST00000317516 EDNRAP25101 427 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 IDUAP35475 653 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 MRPL19P49406 292 aaKnown RBP15.67■□□□□ 0.1
TPM1-203ENST00000317516 FADDQ13158 208 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 RGNQ15493 299 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 PRAMEF8Q5VWM4 474 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 PRAMEF7Q5VXH5 474 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 ZNF836Q6ZNA1 936 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 CADM2Q8N3J6 435 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 LILRB1Q8NHL6 650 aaPredicted RBP15.67■□□□□ 0.1
TPM1-203ENST00000317516 GTPBP3Q969Y2 492 aaKnown RBP15.67■□□□□ 0.1
TPM1-203ENST00000317516 AURKBQ96GD4 344 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms