RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TRBV6-7A0A0A0MS04 114 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 OR6C68A6NDL8 312 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 TBC1D3BA6NDS4 549 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 TBC1D3FA6NER0 549 aaPredicted RBP7.12□□□□□ -1.27
CNOT4-201ENST00000315544 RRASP10301 218 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 SLC25A1P53007 311 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 SNAP47Q5SQN1 464 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 TBC1D3GQ6DHY5 549 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 ZC3H14Q6PJT7 736 aaKnown RBP7.12□□□□□ -1.27
CNOT4-201ENST00000315544 KDF1Q8NAX2 398 aaPredicted RBP7.12□□□□□ -1.27
CNOT4-201ENST00000315544 ABHD4Q8TB40 342 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 ING5Q8WYH8 240 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 CNOT9Q92600 299 aaKnown RBP7.12□□□□□ -1.27
CNOT4-201ENST00000315544 WACQ9BTA9 647 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 CLN6Q9NWW5 311 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 FRRS1LQ9P0K9 344 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 MRPS17Q9Y2R5 130 aaKnown RBP7.12□□□□□ -1.27
CNOT4-201ENST00000315544 PRKAB1Q9Y478 270 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 FAM86C2PA6NEL3 165 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 LYRM1O43325 122 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 OIP5O43482 229 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 ORC5O43913 435 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 APBB3O95704 486 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 PRNPP04156 253 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 ITGB2P05107 769 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 APEHP13798 732 aaKnown RBP7.12□□□□□ -1.27
CNOT4-201ENST00000315544 RPS2P15880 293 aaKnown RBP7.12□□□□□ -1.27
CNOT4-201ENST00000315544 S100A1P23297 94 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 KIR3DL2P43630 455 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 UCP2P55851 309 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 ROM1Q03395 351 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 TOMM20Q15388 145 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 TMEM151BQ8IW70 566 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 POC5Q8NA72 575 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 OR2T4Q8NH00 348 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 DEDD2Q8WXF8 326 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 ACOT12Q8WYK0 555 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 SIPA1Q96FS4 1042 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 MRGPRX1Q96LB2 322 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 RAB33BQ9H082 229 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 EMC3Q9P0I2 261 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 TMCC3Q9ULS5 477 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 M0R3G1 203 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 TO15178 435 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 NAT1P18440 290 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 NRG3P56975 720 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 BAMBIQ13145 260 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 CLLU1Q5K131 121 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 WDR45BQ5MNZ6 344 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 OVCH2Q7RTZ1 564 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 RAD51AP1Q96B01 352 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 GAREM1Q9H706 876 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 C12orf10Q9HB07 376 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 MGAT4CQ9UBM8 478 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 MRM2Q9UI43 246 aaKnown RBP7.12□□□□□ -1.27
CNOT4-201ENST00000315544 SPATA2Q9UM82 520 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 PCDHB10Q9UN67 800 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 FRS3O43559 492 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 ICMTO60725 284 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 MYL9P24844 172 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 SHC1P29353 583 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 PTGDSP41222 190 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 SOX9P48436 509 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 PDZK1Q5T2W1 519 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 CCDC81Q6ZN84 652 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 OR56A1Q8NGH5 318 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 OR13C5Q8NGS8 318 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 OR8K5Q8NH50 307 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 BHMTQ93088 406 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 RBM18Q96H35 190 aaKnown RBP7.11□□□□□ -1.27
CNOT4-201ENST00000315544 SLC22A4Q9H015 551 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 TMEM100Q9NV29 134 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 TAS2R5Q9NYW4 299 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 OR6C2Q9NZP2 312 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 GPSM3Q9Y4H4 160 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 NDUFV2P19404 249 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 EEF1B2P24534 225 aaKnown RBP7.11□□□□□ -1.27
CNOT4-201ENST00000315544 IFNGR2P38484 337 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 HGFACQ04756 655 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF626Q68DY1 528 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 SHFQ7M4L6 423 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 ARMC10Q8N2F6 343 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 ADAMTS14Q8WXS8 1223 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 MED8Q96G25 268 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 DHRS9Q9BPW9 319 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 SH2D2AQ9NP31 389 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 FAM60AQ9NP50 221 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 PNRC2Q9NPJ4 139 aaKnown RBP7.11□□□□□ -1.27
CNOT4-201ENST00000315544 TIGARQ9NQ88 270 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 SLC7A7Q9UM01 511 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 IGLV1-36A0A0B4J1U3 117 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 SMLR1H3BR10 107 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 RGS9O75916 674 aaPredicted RBP7.11□□□□□ -1.27
CNOT4-201ENST00000315544 IL2RAP01589 272 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 FSTP19883 344 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 ERP29P30040 261 aaKnown RBP7.11□□□□□ -1.27
CNOT4-201ENST00000315544 GPR4P46093 362 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 KHKP50053 298 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 PPP1CAP62136 330 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 MAT1AQ00266 395 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms