RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 HNRNPA2B1P22626 353 aaKnown RBP23.3■■□□□ 1.32
HOXB3-201ENST00000311626 GDI2P50395 445 aaKnown RBP23.3■■□□□ 1.32
HOXB3-201ENST00000311626 NRG3P56975 720 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 TMEM92Q6UXU6 159 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 SIAH3Q8IW03 269 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 RSC1A1Q92681 617 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 CTHRC1Q96CG8 243 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 NMNAT3Q96T66 252 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 ZNF222Q9UK12 451 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 COPS3Q9UNS2 423 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 ARHGEF9O43307 516 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 SC5DO75845 299 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 ALX3O95076 343 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 ADRB1P08588 477 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 SLC6A6P31641 620 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 RPL4P36578 427 aaKnown RBP23.29■■□□□ 1.32
HOXB3-201ENST00000311626 RPL13AP3Q6NVV1 102 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 METTL27Q8N6F8 245 aaPredicted RBP23.29■■□□□ 1.32
HOXB3-201ENST00000311626 FOLH1BQ9HBA9 442 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 LRIT1Q9P2V4 623 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 HEATR5AQ86XA9 2040 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 ALPK2Q86TB3 2170 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 C2orf74A8MZ97 194 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 FMO6PO60774 539 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 NKX2-2O95096 273 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 APBB3O95704 486 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 ST6GAL1P15907 406 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 PGDP52209 483 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 SLC37A2Q8TED4 501 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 IRF2BPLQ9H1B7 796 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 INPP5EQ9NRR6 644 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 A0A1B0GVT2 93 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 ANKRD34CP0C6C1 535 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 TIGD3Q6B0B8 471 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 OR6K6Q8NGW6 343 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 RASD2Q96D21 266 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 SLC25A18Q9H1K4 315 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 MED28Q9H204 178 aa23.29■■□□□ 1.32
HOXB3-201ENST00000311626 MT-ND4P03905 459 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 S1PR1P21453 382 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 TPMTP51580 245 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 BTG2P78543 158 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 ILF3Q12906 894 aaKnown RBP eCLIP23.28■■□□□ 1.32
HOXB3-201ENST00000311626 TNK1Q13470 666 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 RCBTB1Q8NDN9 531 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 OR11H7Q8NGC8 314 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 SNX33Q8WV41 574 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 DACT3Q96B18 629 aaPredicted RBP23.28■■□□□ 1.32
HOXB3-201ENST00000311626 DERL3Q96Q80 235 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 MTIF3Q9H2K0 278 aaKnown RBP23.28■■□□□ 1.32
HOXB3-201ENST00000311626 TP53BP1Q12888 1972 aaPredicted RBP23.28■■□□□ 1.32
HOXB3-201ENST00000311626 CTHP32929 405 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 DLX2Q07687 328 aaPredicted RBP23.28■■□□□ 1.32
HOXB3-201ENST00000311626 CEP78Q5JTW2 689 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 YIPF5Q969M3 257 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 DNAJA3Q96EY1 480 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 NIPAL2Q9H841 368 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 SLC23A1Q9UHI7 598 aa23.28■■□□□ 1.32
HOXB3-201ENST00000311626 TRBV2A0A0J9YWF9 115 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 EDNRAP25101 427 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 ZNF267Q14586 743 aaPredicted RBP23.27■■□□□ 1.32
HOXB3-201ENST00000311626 NPSR1Q6W5P4 371 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 TPRA1Q86W33 373 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 SLC22A18ASQ8N1D0 253 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 TOMM5Q8N4H5 51 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 AVL9Q8NBF6 648 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 KCTD12Q96CX2 325 aaKnown RBP23.27■■□□□ 1.32
HOXB3-201ENST00000311626 LMF1Q96S06 567 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 GON7Q9BXV9 100 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 AUNIPQ9H7T9 357 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 CHRNA9Q9UGM1 479 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 TMA7Q9Y2S6 64 aaKnown RBP23.27■■□□□ 1.32
HOXB3-201ENST00000311626 NDUFB5O43674 189 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 IFNGP01579 166 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 EPXP11678 715 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 CXCL3P19876 107 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 ERVK-25P63136 954 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 PYHIN1Q6K0P9 492 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 LIX1LQ8IVB5 337 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 SLC35F2Q8IXU6 374 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 OR4C3Q8NH37 302 aa23.27■■□□□ 1.32
HOXB3-201ENST00000311626 A0A0J9YY10 115 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 NOTOA8MTQ0 251 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 H3BSH0 61 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 TAS2R43P59537 309 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 RPS11P62280 158 aaKnown RBP eCLIP23.26■■□□□ 1.31
HOXB3-201ENST00000311626 HES5Q5TA89 166 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 SERPINA12Q8IW75 414 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 GRPEL2Q8TAA5 225 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 DZANK1Q9NVP4 752 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 RPS6KB2Q9UBS0 482 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 TRIM3O75382 744 aaPredicted RBP23.26■■□□□ 1.31
HOXB3-201ENST00000311626 ARHGAP11AQ6P4F7 1023 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 ZCCHC12Q6PEW1 402 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 UBE2Q1Q7Z7E8 422 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 PLCZ1Q86YW0 608 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 RIT1Q92963 219 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 C14orf105Q9NVL8 296 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 NKIRAS2Q9NYR9 191 aa23.26■■□□□ 1.31
HOXB3-201ENST00000311626 ANKRD61A6NGH8 418 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms