RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 ZNF584Q8IVC4 421 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 GTPBP8Q8N3Z3 284 aaPredicted RBP12.49□□□□□ -0.41
SEC23A-201ENST00000307712 OR52E1Q8NGJ3 308 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 INSM2Q96T92 566 aaPredicted RBP12.49□□□□□ -0.41
SEC23A-201ENST00000307712 GPA33Q99795 319 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 DPYSL5Q9BPU6 564 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 METTL8Q9H825 291 aaKnown RBP12.49□□□□□ -0.41
SEC23A-201ENST00000307712 LIN7BQ9HAP6 207 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 METTL21EPA6NDL7 271 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 APODP05090 189 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 PRKAR1BP31321 381 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 PXNP49023 591 aaPredicted RBP12.49□□□□□ -0.41
SEC23A-201ENST00000307712 ZCCHC12Q6PEW1 402 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 TSSK4Q6SA08 328 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
SEC23A-201ENST00000307712 AMER3Q8N944 861 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 ANKRD53Q8N9V6 530 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 SEC22AQ96IW7 307 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 DERL3Q96Q80 235 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 AGAP14A8MT82 685 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 KDM4EB2RXH2 506 aaPredicted RBP12.49□□□□□ -0.41
SEC23A-201ENST00000307712 PBX2P40425 430 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 CEBPGP53567 150 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 C21orf58P58505 322 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 MRPS10P82664 201 aaKnown RBP12.49□□□□□ -0.41
SEC23A-201ENST00000307712 CDK3Q00526 305 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 GFOD2Q3B7J2 385 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 FAM76BQ5HYJ3 339 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 CNKSR3Q6P9H4 555 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 ZNF101Q8IZC7 436 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 CMTM4Q8IZR5 234 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 METTL21AQ8WXB1 218 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 NRTNQ99748 197 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 SYT4Q9H2B2 425 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 WASH6PQ9NQA3 447 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 KLK11Q9UBX7 282 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 FBXL21Q9UKT6 434 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
SEC23A-201ENST00000307712 LRIT2A6NDA9 550 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 KHNYNO15037 678 aaKnown RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 HYAL3O43820 417 aaPredicted RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 PTHLHP12272 177 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 S100A10P60903 97 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 LTBQ06643 244 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 ARFRP1Q13795 201 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 YOD1Q5VVQ6 348 aaPredicted RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 GLT8D1Q68CQ7 371 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 CDRT4Q8N9R6 151 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 RELL2Q8NC24 303 aaPredicted RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 VN1R2Q8NFZ6 395 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 OR11H7Q8NGC8 314 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 C19orf43Q9BQ61 176 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 BCL2L10Q9HD36 194 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 HRASLSQ9HDD0 168 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 CBLCQ9ULV8 474 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 GPR55Q9Y2T6 319 aaPredicted RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 HRH3Q9Y5N1 445 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 NPIPB8E9PQR5 432 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 EIF1AYO14602 144 aaKnown RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 PPM1BO75688 479 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 TFPIP10646 304 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 GPR143P51810 404 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 TMUB2Q71RG4 321 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 GLB1L2Q8IW92 636 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 C12orf45Q8N5I9 185 aaPredicted RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 DNAAF1Q8NEP3 725 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 ARRDC3Q96B67 414 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 SPACA7Q96KW9 195 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 SLC6A18Q96N87 628 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 NMNAT3Q96T66 252 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 ZNF281Q9Y2X9 895 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 ANK1P16157 1881 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 DCDC2BA2VCK2 349 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 H3BUI4 141 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 WNT1P04628 370 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 RAB40ALP0C0E4 278 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 AKR1C4P17516 323 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 MAKP20794 623 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 CXCR1P25024 350 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 NDUFS1P28331 727 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 OR3A2P47893 321 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 SEC61A1P61619 476 aaKnown RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 ZNF169Q14929 603 aaPredicted RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 STK11Q15831 433 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 RAB11BQ15907 218 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 RNASE10Q5GAN6 216 aaKnown RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 ABHD17CQ6PCB6 329 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 KLHL24Q6TFL4 600 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 SCARB1Q8WTV0 552 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 RAB40AQ8WXH6 277 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 DVL3Q92997 716 aaPredicted RBP12.48□□□□□ -0.41
SEC23A-201ENST00000307712 SLC35A4Q96G79 324 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 DLL4Q9NR61 685 aa12.48□□□□□ -0.41
SEC23A-201ENST00000307712 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
SEC23A-201ENST00000307712 AKAIN1P0CW23 69 aa12.47□□□□□ -0.41
SEC23A-201ENST00000307712 ATF1P18846 271 aa12.47□□□□□ -0.41
SEC23A-201ENST00000307712 SRMP19623 302 aa12.47□□□□□ -0.41
SEC23A-201ENST00000307712 DLSTP36957 453 aa12.47□□□□□ -0.41
SEC23A-201ENST00000307712 BCL6P41182 706 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms