RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 A0A1B0GWA3 101 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 A0A1W2PNV4 684 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 NKX2-6A6NCS4 301 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 CPSF4LA6NMK7 179 aaKnown RBP9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 A8MVM7 634 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 B2RBV5 119 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 DNPH1O43598 174 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 FMO6PO60774 539 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 AHSA1O95433 338 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 PMS2P2O95744 297 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 ZNF682O95780 498 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 CLDN1O95832 211 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 GGT1P19440 569 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 TCN1P20061 433 aaPredicted RBP9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 HTR2AP28223 471 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 HTR1EP28566 365 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 IFNA8P32881 189 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 IDUAP35475 653 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 ASCL1P50553 236 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 AGFG1P52594 562 aaKnown RBP9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 OR2B6P58173 313 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 MYBPHQ13203 477 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 RNPS1Q15287 305 aaKnown RBP9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 OR1Q1Q15612 314 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 ZNF613Q6PF04 617 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 ULK3Q6PHR2 472 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 C5orf46Q6UWT4 87 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 DEF8Q6ZN54 512 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 ATG4DQ86TL0 474 aaPredicted RBP9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 COMTD1Q86VU5 262 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 CARM1Q86X55 608 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SLC43A2Q8N370 569 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 RNF148Q8N7C7 305 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 OR6T1Q8NGN1 323 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 STK35Q8TDR2 534 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 RNF128Q8TEB7 428 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 ROBO4Q8WZ75 1007 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 DNAJA3Q96EY1 480 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 GMPPAQ96IJ6 420 aaPredicted RBP9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 PSMG3-AS1Q96PY0 264 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 CDRT15Q96T59 188 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 PIGMQ9H3S5 423 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 CHST11Q9NPF2 352 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 KLHL9Q9P2J3 617 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 GMPR2Q9P2T1 348 aaKnown RBP9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 EGFL7Q9UHF1 273 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 MAGEL2Q9UJ55 1249 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 RPS6KA6Q9UK32 745 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 PACSIN3Q9UKS6 424 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SH3GLB1Q9Y371 365 aa9.85□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SPTBN1Q01082 2364 aaKnown RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 IGHV3-15A0A0B4J1V0 119 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 A0A0B4J2E0 115 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 A0A1B0GX12 115 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SMNDC1O75940 238 aaKnown RBP eCLIP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 AQP8O94778 261 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 PRKD3O94806 890 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 STAMBPO95630 424 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SERPINA1P01009 418 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 GPIP06744 558 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 HSD17B1P14061 328 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 NCK1P16333 377 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 TAS2R41P59536 307 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SELENOWP63302 87 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SLC35A1P78382 337 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 FOXF2Q12947 444 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 BNIP2Q12982 314 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SPATS1Q496A3 300 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 ENTPD8Q5MY95 495 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 TMEM201Q5SNT2 666 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SWT1Q5T5J6 900 aaKnown RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 GLYATQ6IB77 296 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 C6orf89Q6UWU4 347 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 FKBP9P1Q75LS8 142 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 ARHGAP24Q8N264 748 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 RELL2Q8NC24 303 aaPredicted RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 RBM15BQ8NDT2 890 aaKnown RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 PIGXQ8TBF5 258 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 GEMIN6Q8WXD5 167 aaKnown RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SLC38A4Q969I6 547 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 ARL5BQ96KC2 179 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 EPYCQ99645 322 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 TACO1Q9BSH4 297 aaKnown RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 NAA11Q9BSU3 229 aaPredicted RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 POTEKPQ9BYX7 375 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 UCK2Q9BZX2 261 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 POLR2J2Q9GZM3 115 aaKnown RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 POLR2J3Q9H1A7 115 aaKnown RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 C6orf203Q9P0P8 240 aaPredicted RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 CLEC4AQ9UMR7 237 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 SAMD4AQ9UPU9 718 aaKnown RBP9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 TRAPPC4Q9Y296 219 aa9.84□□□□□ -0.83
CSPG4P1Y-201ENST00000306641 ZC3H12DA2A288 527 aaKnown RBP9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 TRAPPC13A5PLN9 417 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 TMEM229AB2RXF0 380 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 CHP2O43745 196 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 EIF1BO60739 113 aaKnown RBP9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 SS18L1O75177 396 aaPredicted RBP9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 UBOX5O94941 541 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 IFNW1P05000 195 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms