RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 KCTD7Q96MP8 289 aa8.53□□□□□ -1.04
PTPRE-202ENST00000306042 PHF12Q96QT6 1004 aa8.53□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF223Q9UK11 482 aaPredicted RBP8.53□□□□□ -1.04
PTPRE-202ENST00000306042 PAIP2BQ9ULR5 123 aaKnown RBP8.53□□□□□ -1.04
PTPRE-202ENST00000306042 PCDHB10Q9UN67 800 aa8.53□□□□□ -1.04
PTPRE-202ENST00000306042 PROCRQ9UNN8 238 aa8.53□□□□□ -1.04
PTPRE-202ENST00000306042 GLSO94925 669 aaPredicted RBP8.52□□□□□ -1.04
PTPRE-202ENST00000306042 ITGB2P05107 769 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 DCKP27707 260 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 OR3A3P47888 321 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 OR3A2P47893 321 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 IL18Q14116 193 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 GAB4Q2WGN9 574 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF385BQ569K4 471 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 RNASE12Q5GAN4 147 aaKnown RBP8.52□□□□□ -1.04
PTPRE-202ENST00000306042 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.52□□□□□ -1.04
PTPRE-202ENST00000306042 SAXO2Q658L1 398 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF613Q6PF04 617 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 BORAQ6PGQ7 559 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 FAM181AQ8N9Y4 354 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 YTHDF1Q9BYJ9 559 aaKnown RBP8.52□□□□□ -1.04
PTPRE-202ENST00000306042 ABCB9Q9NP78 766 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 RAB9BQ9NP90 201 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 MRPL39Q9NYK5 338 aaKnown RBP8.52□□□□□ -1.04
PTPRE-202ENST00000306042 RSL24D1Q9UHA3 163 aaKnown RBP8.52□□□□□ -1.04
PTPRE-202ENST00000306042 FKBP7Q9Y680 259 aa8.52□□□□□ -1.04
PTPRE-202ENST00000306042 TRGV5A0A0B4J1U4 118 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 PMS2P1A4D2B8 440 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 C12orf71A8MTZ7 269 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 K7ESF4 209 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 DVL2O14641 736 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 HSPA12AO43301 675 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 PLATP00750 562 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 GPX2P18283 190 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 LCN1P31025 176 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 POU3F4P49335 361 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 MVKQ03426 396 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 TAB1Q15750 504 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 CWF19L1Q69YN2 538 aaKnown RBP8.52□□□□□ -1.05
PTPRE-202ENST00000306042 KLHL17Q6TDP4 642 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 C6orf89Q6UWU4 347 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 FAM131AQ6UXB0 335 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF836Q6ZNA1 936 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 OR1J2Q8NGS2 313 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 FBP2O00757 339 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 VAMP5O95183 116 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 NR4A1P22736 598 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 SLC1A3P43003 542 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 MTNR1AP48039 350 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 LSSP48449 732 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 PCYT1AP49585 367 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 BIDP55957 195 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 SCRN3Q0VDG4 424 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 ST3GAL4Q11206 333 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 EIF2S3LQ2VIR3 472 aaKnown RBP8.52□□□□□ -1.05
PTPRE-202ENST00000306042 SLC36A2Q495M3 483 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF813Q6ZN06 617 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 CCDC54Q8NEL0 328 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 ZMYND19Q96E35 227 aaPredicted RBP8.52□□□□□ -1.05
PTPRE-202ENST00000306042 DIRAS2Q96HU8 199 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 SLC41A2Q96JW4 573 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 TMEM138Q9NPI0 162 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 KLHL13Q9P2N7 655 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 H3BNX3 289 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 GDF9O60383 454 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 LINC00271P0C7V0 271 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 CELP19835 753 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 GSTT1P30711 240 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 ARHGDIBP52566 201 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 NKPD1Q17RQ9 610 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 TNFAIP8L3Q5GJ75 292 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 FAM205BPQ63HN1 556 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 B3GNT8Q7Z7M8 397 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 SLC15A4Q8N697 577 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 ST8SIA1Q92185 356 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 SLC7A6OSQ96CW6 309 aaPredicted RBP8.52□□□□□ -1.05
PTPRE-202ENST00000306042 TMEM41AQ96HV5 264 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 INTS14Q96SY0 518 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 LAT2Q9GZY6 243 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 SNTG1Q9NSN8 517 aa8.52□□□□□ -1.05
PTPRE-202ENST00000306042 ISPDA4D126 451 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 ANKRD30BLA7E2S9 258 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 IGLV3-19P01714 112 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 CD36P16671 472 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 MEOX1P50221 254 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 EMP3P54852 163 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 CDH15P55291 814 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 RAB25P57735 213 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 MS4A2Q01362 244 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 GLYR1Q49A26 553 aaPredicted RBP8.51□□□□□ -1.05
PTPRE-202ENST00000306042 CEP78Q5JTW2 689 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 GLT8D1Q68CQ7 371 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 SLC25A24Q6NUK1 477 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF793Q6ZN11 406 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 LRRC18Q8N456 261 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 TEX37Q96LM6 180 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 MED18Q9BUE0 208 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 ASB4Q9Y574 426 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 CACNA1HO95180 2353 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 A0A087WZY1 265 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms