RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PROKR2Q8NFJ6 384 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 BBS1Q8NFJ9 593 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 ZFAND2BQ8WV99 257 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 METTL7AQ9H8H3 244 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 MED20Q9H944 212 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 TNFRSF10DQ9UBN6 386 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 FRYLO94915 3013 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 CCRL2O00421 344 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 SOCS6O14544 535 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 ZNF806P0C7X5 589 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 CD59P13987 128 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 ACVR2AP27037 513 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 HTR1FP30939 366 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 SERPINB10P48595 397 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 RGS6P49758 472 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 PRPS1P60891 318 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 CTF1Q16619 201 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 TMEM164Q5U3C3 297 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 CYB561A3Q8NBI2 242 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 OR51G2Q8NGK0 314 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 CDC6Q99741 560 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 TMEM43Q9BTV4 400 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 TAPBPLQ9BX59 468 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 RTN4RQ9BZR6 473 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 MCCC2Q9HCC0 563 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 TAS2R10Q9NYW0 307 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 MYOTQ9UBF9 498 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 IER3IP1Q9Y5U9 82 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 COL5A1P20908 1838 aaPredicted RBP13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 OR2J2O76002 312 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 GADD45AP24522 165 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 NCS1P62166 190 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 GXYLT1Q4G148 440 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 C3orf38Q5JPI3 329 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 AADACL4Q5VUY2 407 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 FAM198BQ6UWH4 519 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 SLC46A3Q7Z3Q1 461 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 TMEM234Q8WY98 164 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 RPL3LQ92901 407 aaKnown RBP13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 CHCHD6Q9BRQ6 235 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 RACGAP1Q9H0H5 632 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 C2orf72A6NCS6 295 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 FADS1O60427 444 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 CSO75390 466 aaKnown RBP13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 CD63P08962 238 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 TSPAN19P0C672 248 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 C17orf67Q0P5P2 114 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 QPRTQ15274 297 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 NANOGNBQ7Z5D8 188 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 OR4F15Q8NGB8 312 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 OR52E2Q8NGJ4 325 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 OR2Y1Q8NGV0 311 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 PPIEQ9UNP9 301 aaKnown RBP13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 WDFY4Q6ZS81 3184 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 CDX4O14627 284 aaPredicted RBP13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 AQP6Q13520 282 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 TOMM34Q15785 309 aaPredicted RBP13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 DGUOKQ16854 277 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 COL28A1Q2UY09 1125 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 PAQR6Q6TCH4 344 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 MEPCEQ7L2J0 689 aaKnown RBP13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 NUP54Q7Z3B4 507 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 LHFPL3Q86UP9 236 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 NANOGP1Q8N7R0 232 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 OR4K13Q8NH42 304 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 DNAJA3Q96EY1 480 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 SECISBP2Q96T21 854 aaKnown RBP13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 ZPBPQ9BS86 351 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 KLHL1Q9NR64 748 aa13.23□□□□□ -0.29
SHCBP1-201ENST00000303383 MPDZO75970 2070 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 SLC22A31A6NKX4 558 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 C17orf51A8MQB3 221 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 NAGAP17050 411 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 TGFBR2P37173 567 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 ETV5P41161 510 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 CLDN6P56747 220 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 ITGADQ13349 1161 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 CRMP1Q14194 572 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 EXT1Q16394 746 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 C6orf15Q6UXA7 325 aaPredicted RBP13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 PSD4Q8NDX1 1056 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 TAAR9Q96RI9 348 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 FGF20Q9NP95 211 aaPredicted RBP13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 SDHAF3Q9NRP4 125 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 PPP4R1LQ9P1A2 415 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 OSGIN1Q9UJX0 560 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 NSG1A0A0A6YYJ2 146 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 C4orf47A7E2U8 309 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 TCN2P20062 427 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 RPS5P46782 204 aaKnown RBP13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 ETV1P50549 477 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 SDR9C7Q8NEX9 313 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 NDNFQ8TB73 568 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 SNRNP27Q8WVK2 155 aaKnown RBP13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 SLC25A36Q96CQ1 311 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 C12orf10Q9HB07 376 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 MCIDASD6RGH6 385 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 ADRA2AP08913 450 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 POLR2HP52434 150 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms