RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 PFN4Q8NHR9 129 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SMAP2Q8WU79 429 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SNX18Q96RF0 628 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 ESRP2Q9H6T0 727 aaKnown RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 CDC14BO60729 498 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SCGB2A1O75556 95 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 RAB6AP20340 208 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 BLOC1S3Q6QNY0 202 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 CPEB2Q7Z5Q1 589 aaKnown RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 PM20D2Q8IYS1 436 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM255BQ8WV15 326 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 TRIB3Q96RU7 358 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 WASH6PQ9NQA3 447 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 QPCTLQ9NXS2 382 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 COLQQ9Y215 455 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 HSPB11Q9Y547 144 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 G3V2L1 256 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 CTGFP29279 349 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 STEAP4Q687X5 459 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 FRZBQ92765 325 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 TSLPQ969D9 159 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 P2RY12Q9H244 342 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 SPEF2Q9C093 1822 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 I3L521 148 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 NME4O00746 187 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF264O43296 627 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 LILRB5O75023 590 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 OMGP23515 440 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 HTR1EP28566 365 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 TSFMP43897 325 aaKnown RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 LUMP51884 338 aaPredicted RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 HBA1P69905 142 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 USF2Q15853 346 aaPredicted RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 GSG1LQ6UXU4 331 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF813Q6ZN06 617 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 PHC2Q8IXK0 858 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 PDZD9Q8IXQ8 264 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 RASD2Q96D21 266 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 BTBD2Q9BX70 525 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 GALNT9Q9HCQ5 603 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 OBP2AQ9NY56 170 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 EBF1Q9UH73 591 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 B4DXG7 233 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 SEMG1P04279 462 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ICAM2P13598 275 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 CAMLGP49069 296 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 PRPS1P60891 318 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 TNFRSF17Q02223 184 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 PRDX1Q06830 199 aaKnown RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 BEST4Q8NFU0 473 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 OR10K1Q8NGX5 313 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 NMNAT3Q96T66 252 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 C4BP0C0L5 1744 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 LOC102725191A0A1B0GVB3 256 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 SLC22A1O15245 554 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 DENRO43583 198 aaKnown RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 SPRY3O43610 288 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 TYROBPO43914 113 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF254O75437 659 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 IFNA4P05014 189 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 SERPINE2P07093 398 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 C8BP07358 591 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 HOXD8P13378 290 aaPredicted RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 AOAHP28039 575 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ACTA2P62736 377 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ACTG2P63267 376 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 FADDQ13158 208 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 TRMT12Q53H54 448 aaKnown RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 RNASE10Q5GAN6 216 aaKnown RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 PIGGQ5H8A4 983 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM205Q6UW68 189 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 PIGQQ9BRB3 760 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 MMP28Q9H239 520 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 GPR173Q9NS66 373 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM14AQ9Y6G1 99 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 GIPRP48546 466 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ADPRMQ3LIE5 342 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 MEDAGQ5VYS4 303 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 UGT2A3Q6UWM9 527 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 MIB2Q96AX9 1013 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 OR52D1Q9H346 318 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 RGPD2P0DJD1 1756 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 H7C1Q1 480 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 SCAF4O95104 1147 aaKnown RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 AK1P00568 194 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 MAKP20794 623 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF404Q494X3 552 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 LILRA2Q8N149 483 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ZFPM2Q8WW38 1151 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 PPT2Q9UMR5 302 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 PCDHGA5Q9Y5G8 931 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 MT-ND4P03905 459 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 GGT1P19440 569 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF77Q15935 545 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 PRTGQ2VWP7 1150 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 SYT13Q7L8C5 426 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 SECTM1Q8WVN6 248 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 EMC7Q9NPA0 242 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 NDUFAF4Q9P032 175 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 MYH13Q9UKX3 1938 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms