RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 CCDC115Q96NT0 180 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 TAS2R16Q9NYV7 291 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 MALT1Q9UDY8 824 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 BTNL2Q9UIR0 455 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 HAO1Q9UJM8 370 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 POU2F3Q9UKI9 436 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 TRAPPC4Q9Y296 219 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 DNHD1Q96M86 4753 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 TMED7-TICAM2A0A0A6YYA0 188 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 CD40P25942 277 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 TTKP33981 857 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 NME5P56597 212 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 H3F3AP84243 136 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 GABRA6Q16445 453 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 OR7E24Q6IFN5 339 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 CXXC5Q7LFL8 322 aaKnown RBP17.25■□□□□ 0.35
CXCL3-201ENST00000296026 CMIPQ8IY22 773 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 MREGQ8N565 214 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 OR52E4Q8NGH9 312 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 MUS81Q96NY9 551 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 TRNT1Q96Q11 434 aaKnown RBP17.25■□□□□ 0.35
CXCL3-201ENST00000296026 PANX1Q96RD7 426 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 DHRS9Q9BPW9 319 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 CACNG6Q9BXT2 260 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 SLC38A1Q9H2H9 487 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 MEAF6Q9HAF1 191 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 PNPOQ9NVS9 261 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 OSGIN1Q9UJX0 560 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 TMED7Q9Y3B3 224 aa17.25■□□□□ 0.35
CXCL3-201ENST00000296026 TMEM72A0PK05 275 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 CCDC154A6NI56 674 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 AGAP5A6NIR3 686 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 M0R1B8 84 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 TLX2O43763 284 aaPredicted RBP17.24■□□□□ 0.35
CXCL3-201ENST00000296026 CD5LO43866 347 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 CHRM4P08173 479 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 ITGA5P08648 1049 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 POLR2HP52434 150 aaKnown RBP17.24■□□□□ 0.35
CXCL3-201ENST00000296026 NUDT6P53370 316 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 UFM1P61960 85 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 SLC35A1P78382 337 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 IRX1P78414 480 aaPredicted RBP17.24■□□□□ 0.35
CXCL3-201ENST00000296026 STX3Q13277 289 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 MPP2Q14168 576 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 OGFOD2Q6N063 350 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 CASP12Q6UXS9 341 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 TRIML2Q8N7C3 387 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 PMM1Q92871 262 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 DDIT4LQ96D03 193 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 ADAD1Q96M93 576 aaKnown RBP17.24■□□□□ 0.35
CXCL3-201ENST00000296026 RHNO1Q9BSD3 238 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 INPP5KQ9BT40 448 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 C1QTNF6Q9BXI9 259 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 YAE1D1Q9NRH1 226 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 CBLN4Q9NTU7 201 aa17.24■□□□□ 0.35
CXCL3-201ENST00000296026 ZNF208O43345 1280 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 EIF1BO60739 113 aaKnown RBP17.23■□□□□ 0.35
CXCL3-201ENST00000296026 ALDOCP09972 364 aaKnown RBP17.23■□□□□ 0.35
CXCL3-201ENST00000296026 IMPDH2P12268 514 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 TACR3P29371 465 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 CDKN2CP42773 168 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 ANXA11P50995 505 aaKnown RBP17.23■□□□□ 0.35
CXCL3-201ENST00000296026 C9orf135Q5VTT2 229 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 C11orf71Q6IPW1 123 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 B3GLCTQ6Y288 498 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 LRRC74BQ6ZQY2 392 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 ZNF621Q6ZSS3 439 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 FBXL14Q8N1E6 418 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 DEPDC4Q8N2C3 294 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 WDR60Q8WVS4 1066 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 NAA11Q9BSU3 229 aaPredicted RBP17.23■□□□□ 0.35
CXCL3-201ENST00000296026 CENPHQ9H3R5 247 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 KCNK9Q9NPC2 374 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 AIG1Q9NVV5 245 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 PARPBPQ9NWS1 579 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 UPB1Q9UBR1 384 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.23■□□□□ 0.35
CXCL3-201ENST00000296026 SLC9A8Q9Y2E8 581 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 FLVCR1Q9Y5Y0 555 aa17.23■□□□□ 0.35
CXCL3-201ENST00000296026 V9GYY5 206 aaPredicted RBP17.23■□□□□ 0.35
CXCL3-201ENST00000296026 IGHV4-30-2A0A087WSY4 118 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 PDLIM1O00151 329 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 GSNP06396 782 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 PGRP06401 933 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 IL7RP16871 459 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 IL12AP29459 219 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 SLC1A3P43003 542 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 FABP6P51161 128 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 TXNL4AP83876 142 aaKnown RBP17.22■□□□□ 0.35
CXCL3-201ENST00000296026 BST1Q10588 318 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 GNA13Q14344 377 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 MUC15Q8N387 334 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 WDR31Q8NA23 367 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 SPATA3Q8NHX4 192 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 PNPT1Q8TCS8 783 aaKnown RBP17.22■□□□□ 0.35
CXCL3-201ENST00000296026 OR52E6Q96RD3 313 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 AMBRA1Q9C0C7 1298 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 MTHFD2LQ9H903 347 aaPredicted RBP17.22■□□□□ 0.35
CXCL3-201ENST00000296026 SLC7A10Q9NS82 523 aa17.22■□□□□ 0.35
CXCL3-201ENST00000296026 ZC3H12DA2A288 527 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms