RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ZNF74Q16587 644 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 IL20RBQ6UXL0 311 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 HRH3Q9Y5N1 445 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 AHCTF1Q8WYP5 2266 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 TP53I11O14683 189 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 PRODHO43272 600 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 PPP1R3DO95685 299 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 ADRA2AP08913 450 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 SUMO3P55854 103 aaPredicted RBP20.76■□□□□ 0.91
PTX3-201ENST00000295927 MLF1P58340 268 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 SLC35F1Q5T1Q4 408 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 GPR107Q5VW38 600 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 GRINAQ7Z429 371 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 CACTIN-AS1Q8N1I8 211 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 ARMC10Q8N2F6 343 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 SLC43A2Q8N370 569 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 C10orf53Q8N6V4 93 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 ASB15Q8WXK1 588 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 KTI12Q96EK9 354 aaPredicted RBP20.76■□□□□ 0.91
PTX3-201ENST00000295927 SDHAF3Q9NRP4 125 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 PPP4R1LQ9P1A2 415 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 RSL24D1Q9UHA3 163 aaKnown RBP20.76■□□□□ 0.91
PTX3-201ENST00000295927 WIF1Q9Y5W5 379 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 CHCHD2Q9Y6H1 151 aaPredicted RBP20.76■□□□□ 0.91
PTX3-201ENST00000295927 NDUFB2O95178 105 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 SSR4P51571 173 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 LIMK1P53667 647 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 FOXK2Q01167 660 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 AADACL4Q5VUY2 407 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 TMPRSS12Q86WS5 348 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 LIPHQ8WWY8 451 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 NMD3Q96D46 503 aaKnown RBP20.76■□□□□ 0.91
PTX3-201ENST00000295927 MOGAT1Q96PD6 335 aa20.76■□□□□ 0.91
PTX3-201ENST00000295927 MRPS18BQ9Y676 258 aaKnown RBP20.76■□□□□ 0.91
PTX3-201ENST00000295927 TMED7-TICAM2A0A0A6YYA0 188 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 GABREP78334 506 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 LTBQ06643 244 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 CHAF1BQ13112 559 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 IRF3Q14653 427 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 TBCEQ15813 527 aaPredicted RBP20.75■□□□□ 0.91
PTX3-201ENST00000295927 ADGRG3Q86Y34 549 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 TMEM234Q8WY98 164 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 YIPF3Q9GZM5 350 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 HINT3Q9NQE9 182 aaKnown RBP20.75■□□□□ 0.91
PTX3-201ENST00000295927 BAIAP2Q9UQB8 552 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 TMED7Q9Y3B3 224 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 COMMD3-BMI1R4GMX3 469 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 ZNF292O60281 2723 aa20.75■□□□□ 0.91
PTX3-201ENST00000295927 IGLV3-32A0A0A0MS00 114 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 LCKP06239 509 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 MSX1P28360 303 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 RPS4XP62701 263 aaKnown RBP20.74■□□□□ 0.91
PTX3-201ENST00000295927 GXYLT1Q4G148 440 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 SYT6Q5T7P8 510 aaPredicted RBP20.74■□□□□ 0.91
PTX3-201ENST00000295927 ST8SIA1Q92185 356 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 TAAR8Q969N4 342 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 CDCA4Q9BXL8 241 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 NANSQ9NR45 359 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 CMC2Q9NRP2 79 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 SNTNA6NMZ2 147 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 SUSD5O60279 629 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 PRKCAP17252 672 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 CSRP1P21291 193 aaKnown RBP20.74■□□□□ 0.91
PTX3-201ENST00000295927 ACVR2AP27037 513 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 DCKP27707 260 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 UBE2UQ5VVX9 321 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 CXXC5Q7LFL8 322 aaKnown RBP20.74■□□□□ 0.91
PTX3-201ENST00000295927 IGFN1Q86VF2 1251 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 CPOQ8IVL8 374 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 ISOC1Q96CN7 298 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 TMEM80Q96HE8 168 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 FAM117AQ9C073 453 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 TAS2R16Q9NYV7 291 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 PCDHGB6Q9Y5F9 930 aa20.74■□□□□ 0.91
PTX3-201ENST00000295927 TMEM72A0PK05 275 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 ZC3H12DA2A288 527 aaKnown RBP20.73■□□□□ 0.91
PTX3-201ENST00000295927 FAM183AA6NL82 134 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 MCIDASD6RGH6 385 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 SLC25A12O75746 678 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 HTR3AP46098 478 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 RPS5P46782 204 aaKnown RBP20.73■□□□□ 0.91
PTX3-201ENST00000295927 TMEM44Q2T9K0 475 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 NXNL2Q5VZ03 156 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 ARSKQ6UWY0 536 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 TMEM156Q8N614 296 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 BBS1Q8NFJ9 593 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 FCGR1BQ92637 280 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 NPAS1Q99742 590 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 TAPBPLQ9BX59 468 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 NAA50Q9GZZ1 169 aaKnown RBP20.73■□□□□ 0.91
PTX3-201ENST00000295927 FN3KQ9H479 309 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 CPNE5Q9HCH3 593 aa20.73■□□□□ 0.91
PTX3-201ENST00000295927 WARS2Q9UGM6 360 aaKnown RBP20.73■□□□□ 0.91
PTX3-201ENST00000295927 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.73■□□□□ 0.91
PTX3-201ENST00000295927 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 SERPINA7P05543 415 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 ASAH2BP0C7U1 165 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 PEPDP12955 493 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 PSMB9P28065 219 aa20.72■□□□□ 0.91
PTX3-201ENST00000295927 CDH11P55287 796 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms