RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 P3H2Q8IVL5 708 aa17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 POC1BQ8TC44 478 aa17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 GNPDA2Q8TDQ7 276 aa17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 DTNBP1Q96EV8 351 aa17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 FAM46AQ96IP4 442 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 PITX2Q99697 317 aa17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 GPA33Q99795 319 aa17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 C20orf141Q9NUB4 165 aa17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 NDRG4Q9ULP0 352 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 MRPS18CQ9Y3D5 142 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 MPDZO75970 2070 aa17.12■□□□□ 0.33
PDLIM3-202ENST00000284770 BCKDKO14874 412 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 SUSD5O60279 629 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 LYNP07948 512 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 IFI30P13284 250 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 CCNA2P20248 432 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 MEOX1P50221 254 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 MAP2K6P52564 334 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 EGR4Q05215 589 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 IL18R1Q13478 541 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 GLYR1Q49A26 553 aaPredicted RBP17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 ZNF691Q5VV52 312 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 CDK20Q8IZL9 346 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 GTPBP8Q8N3Z3 284 aaPredicted RBP17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 SLC39A7Q92504 469 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 EXTL1Q92935 676 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 BPIFA2Q96DR5 249 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 TTTY12Q9BZ98 90 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 UCK2Q9BZX2 261 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 B4GALT7Q9UBV7 327 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 CHRNA9Q9UGM1 479 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 TMEM5Q9Y2B1 443 aa17.11■□□□□ 0.33
PDLIM3-202ENST00000284770 TMEM72A0PK05 275 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 HTR3EA5X5Y0 456 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 SHISA8B8ZZ34 492 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 KLF4O43474 513 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 IGF2P01344 180 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 CRYZQ08257 329 aaKnown RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 COX10Q12887 443 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 HYAL4Q2M3T9 481 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 TMEM44Q2T9K0 475 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 TMPRSS11FQ6ZWK6 438 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 ZFP62Q8NB50 900 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 HRASLS5Q96KN8 279 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 PNPLA3Q9NST1 481 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 ENOPH1Q9UHY7 261 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 A8MVM7 634 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 GLSO94925 669 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 TP53P04637 393 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 GSTM3P21266 225 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 TCEA1P23193 301 aaKnown RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 FPR3P25089 353 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 GDF1P27539 372 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 GSSP48637 474 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 ESRRGP62508 458 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 FOXK1P85037 733 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 TSPAN31Q12999 210 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 TOMM20Q15388 145 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 MEX3DQ86XN8 651 aaKnown RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 C8orf59Q8N0T1 100 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 KDF1Q8NAX2 398 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 ZNF703Q9H7S9 590 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 SERINC1Q9NRX5 453 aa17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 RPH3AQ9Y2J0 694 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-202ENST00000284770 MAGEA13PA6NCF6 341 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 ENO4A6NNW6 628 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 ZNF208O43345 1280 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 EFNA2O43921 213 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 NPIPB7O75200 414 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 PDGFAP04085 211 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 OSMP13725 252 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 ZNF17P17021 662 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 MAKP20794 623 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 RFC3P40938 356 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 GPR4P46093 362 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 RPS6KA3P51812 740 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 ISL1P61371 349 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 PLGLB1Q02325 96 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 Q6ZPB1 254 aaPredicted RBP17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 THAP5Q7Z6K1 395 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 CCDC71Q8IV32 467 aaPredicted RBP17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 OR5M1Q8NGP8 315 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 STK35Q8TDR2 534 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 ABHD17AQ96GS6 310 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 GMPPBQ9Y5P6 360 aa17.09■□□□□ 0.33
PDLIM3-202ENST00000284770 CDC42EP2O14613 210 aa17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 TRAPPC6AO75865 159 aa17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 CHMP24386 653 aa17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 CRISP1P54107 249 aa17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 ALDH6A1Q02252 535 aaKnown RBP17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 RAET1LQ5VY80 246 aa17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 C5orf46Q6UWT4 87 aa17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 FAM83FQ8NEG4 500 aaPredicted RBP17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 OR14L1PQ8NHC6 308 aa17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 KTI12Q96EK9 354 aaPredicted RBP17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 SGTBQ96EQ0 304 aa17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 PIGQQ9BRB3 760 aa17.08■□□□□ 0.33
PDLIM3-202ENST00000284770 OR2B2Q9GZK3 357 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms