RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 MID2Q9UJV3 735 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 TLDC2A0PJX2 215 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 TMEM72A0PK05 275 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 RNF212BA8MTL3 300 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 A8MV72 311 aaPredicted RBP7.84□□□□□ -1.15
TPM3-201ENST00000271850 SULT2B1O00204 365 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 RNASET2O00584 256 aaKnown RBP7.84□□□□□ -1.15
TPM3-201ENST00000271850 CFLARO15519 480 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 STX11O75558 287 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 PMS2P2O95744 297 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 CHRM4P08173 479 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 GUSBP08236 651 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 KRT16P08779 473 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 NUDT17P0C025 328 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 IGHV4-31P0DP07 118 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 IL12AP29459 219 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 RPL3P39023 403 aaKnown RBP7.84□□□□□ -1.15
TPM3-201ENST00000271850 P2RY4P51582 365 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 EMX2Q04743 252 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 CHRNEQ04844 493 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 LOXL1Q08397 574 aaPredicted RBP7.84□□□□□ -1.15
TPM3-201ENST00000271850 KRTAP24-1Q3LI83 254 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 LSM12Q3MHD2 195 aaKnown RBP7.84□□□□□ -1.15
TPM3-201ENST00000271850 C9orf135Q5VTT2 229 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 SAXO2Q658L1 398 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 ARIH2OSQ8N7S6 290 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 ZNF781Q8N8C0 355 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 ZIC4Q8N9L1 334 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 OR8J2Q8NGG1 315 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 CNOT9Q92600 299 aaKnown RBP7.84□□□□□ -1.15
TPM3-201ENST00000271850 TUBGCP3Q96CW5 907 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 HS6ST2Q96MM7 605 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 MUS81Q96NY9 551 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 SORT1Q99523 831 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 DHRS9Q9BPW9 319 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 C1QTNF6Q9BXI9 259 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 AKTIPQ9H8T0 292 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 L2HGDHQ9H9P8 463 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 NGBQ9NPG2 151 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 SLC7A10Q9NS82 523 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 CBLN4Q9NTU7 201 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 ATAD3AQ9NVI7 634 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 CHRNA9Q9UGM1 479 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 FLVCR1Q9Y5Y0 555 aa7.84□□□□□ -1.15
TPM3-201ENST00000271850 VWC2LB2RUY7 222 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 H7C417 338 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 HMGN4O00479 90 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 PHF1O43189 567 aaPredicted RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 AK1P00568 194 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 ALDOCP09972 364 aaKnown RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 ZNF16P17020 682 aaPredicted RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 PGCP20142 388 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 CCNA2P20248 432 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 RPS4Y1P22090 263 aaKnown RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 RYKP34925 604 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 APOBEC1P41238 236 aaKnown RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 CDKN2CP42773 168 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 NUDT6P53370 316 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 VSNL1P62760 191 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 VLDLRP98155 873 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 LGALS3BPQ08380 585 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 CASP8Q14790 479 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 SLC17A1Q14916 467 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 PDCD2Q16342 344 aaPredicted RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 SYPL1Q16563 259 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 PGS1Q32NB8 556 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 SPANXN4Q5MJ08 99 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 TSPO2Q5TGU0 170 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 AGAP6Q5VW22 663 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 EIF3MQ7L2H7 374 aaKnown RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 LINGO2Q7L985 606 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 GRINAQ7Z429 371 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 P2RY8Q86VZ1 359 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 ZNF100Q8IYN0 542 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 MUC15Q8N387 334 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 NATD1Q8N6N6 113 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 ANKFN1Q8N957 763 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 OR4A15Q8NGL6 344 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 C10orf105Q8TEF2 133 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 SLC25A43Q8WUT9 341 aaPredicted RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 APH1AQ96BI3 265 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 ROPN1LQ96C74 230 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 NEURL3Q96EH8 262 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 ZNF385AQ96PM9 386 aaKnown RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 TNFRSF13CQ96RJ3 184 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 SOX7Q9BT81 388 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 RSPO3Q9BXY4 272 aaPredicted RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 SLC38A1Q9H2H9 487 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 ALG2Q9H553 416 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 BARX1Q9HBU1 254 aaPredicted RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 EML4Q9HC35 981 aaKnown RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 EXOSC3Q9NQT5 275 aaKnown RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 TAS2R16Q9NYV7 291 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 OSGIN1Q9UJX0 560 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 NOSIPQ9Y314 301 aaKnown RBP7.83□□□□□ -1.16
TPM3-201ENST00000271850 WDR45Q9Y484 360 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 CHST2Q9Y4C5 530 aa7.83□□□□□ -1.16
TPM3-201ENST00000271850 ATP6V1G2-DDX39BF2Z307 99 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 M0R1B8 84 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 TP53P04637 393 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms