RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 CHID1Q9BWS9 393 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 COQ10BQ9H8M1 238 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 RPS6KB2Q9UBS0 482 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 TMEM72A0PK05 275 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 CD8B2A6NJW9 211 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 CPSF4LA6NMK7 179 aaKnown RBP12.82□□□□□ -0.36
SSBP1-201ENST00000265304 FTCDNL1E5RQL4 147 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 J3KTA2 159 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 SLC19A2O60779 497 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 PMS2P2O95744 297 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 GABRA1P14867 456 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 POU3F2P20265 443 aaPredicted RBP12.82□□□□□ -0.36
SSBP1-201ENST00000265304 FUT4P22083 530 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 IFNA8P32881 189 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 AGFG1P52594 562 aaKnown RBP12.82□□□□□ -0.36
SSBP1-201ENST00000265304 SMIM11AP58511 58 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 TAS2R41P59536 307 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 RAC3P60763 192 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 RBPJQ06330 500 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 TRAM2Q15035 370 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 SF3B4Q15427 424 aaKnown RBP eCLIP12.82□□□□□ -0.365e-6■■□□□ 12.9
SSBP1-201ENST00000265304 WLSQ5T9L3 541 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 DEF8Q6ZN54 512 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 CYP4Z1Q86W10 505 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 SPATA24Q86W54 205 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 DOLPP1Q86YN1 238 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 MEIOBQ8N635 442 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 SLC7A13Q8TCU3 470 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 SEPHS2Q99611 448 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 PTDSS2Q9BVG9 487 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 CALHM2Q9HA72 323 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 SLC7A7Q9UM01 511 aa12.82□□□□□ -0.36
SSBP1-201ENST00000265304 FAM32AQ9Y421 112 aaKnown RBP12.82□□□□□ -0.36
SSBP1-201ENST00000265304 RELNP78509 3460 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 ZC3H12DA2A288 527 aaKnown RBP12.81□□□□□ -0.36
SSBP1-201ENST00000265304 ELOA3DA6NLF2 546 aaPredicted RBP12.81□□□□□ -0.36
SSBP1-201ENST00000265304 NPIPA2E9PIF3 369 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 NPIPA3F8WFD2 350 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 OR2T1O43869 369 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 H1F0P07305 194 aaKnown RBP12.81□□□□□ -0.36
SSBP1-201ENST00000265304 TSPAN19P0C672 248 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 CTBP2P56545 445 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 C19orf57Q0VDD7 668 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 ELOA3BQ3SY89 546 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 TMEM176BQ3YBM2 270 aaPredicted RBP12.81□□□□□ -0.36
SSBP1-201ENST00000265304 RTL6Q6ICC9 239 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 NKAIN4Q8IVV8 208 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 ELOA3Q8NG57 546 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 OR2V1Q8NHB1 315 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 MFSD8Q8NHS3 518 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 ACOT11Q8WXI4 607 aaPredicted RBP12.81□□□□□ -0.36
SSBP1-201ENST00000265304 RELTQ969Z4 430 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 DDIT4LQ96D03 193 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 ARL5BQ96KC2 179 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 FNDC11Q9BVV2 318 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 EXO5Q9H790 373 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 YY1AP1Q9H869 796 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 MEPEQ9NQ76 525 aaPredicted RBP12.81□□□□□ -0.36
SSBP1-201ENST00000265304 SELENONQ9NZV5 590 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 ZNF175Q9Y473 711 aa12.81□□□□□ -0.36
SSBP1-201ENST00000265304 SPTAN1Q13813 2472 aaKnown RBP12.81□□□□□ -0.36
SSBP1-201ENST00000265304 CACNA1CQ13936 2221 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 A0A087WUU8 490 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 LOC102725191A0A1B0GVB3 256 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 LIPT2A6NK58 231 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 H3BML4 177 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 hCG_2039718K7EN88 272 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 PRRG2O14669 202 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 FKBP6O75344 327 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 IMPDH2P12268 514 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 CA7P43166 264 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 RPS3AP61247 264 aaKnown RBP12.8□□□□□ -0.36
SSBP1-201ENST00000265304 MYBPHQ13203 477 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 KPNB1Q14974 876 aaKnown RBP12.8□□□□□ -0.36
SSBP1-201ENST00000265304 FAM69AQ5T7M9 428 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 C1orf140Q5VVS0 124 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 C1QL3Q5VWW1 255 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 NSUN5P2Q63ZY6 315 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 OR2T5Q6IEZ7 315 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 ZFP1Q6P2D0 407 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 OR4C15Q8NGM1 316 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 OR2T29Q8NH02 315 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 TUBA1CQ9BQE3 449 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 OR11A1Q9GZK7 315 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 TP63Q9H3D4 680 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-201ENST00000265304 FANCFQ9NPI8 374 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 PNPLA3Q9NST1 481 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 CLCF1Q9UBD9 225 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 AP4S1Q9Y587 144 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 LYVE1Q9Y5Y7 322 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 V9GYQ6 96 aa12.8□□□□□ -0.36
SSBP1-201ENST00000265304 TRAV36DV7A0A075B6V5 113 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 FIGNL2A6NMB9 653 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 E9PLN8 166 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 H0YC42 278 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 H3BNX3 289 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 HNRNPRO43390 633 aaKnown RBP12.79□□□□□ -0.36
SSBP1-201ENST00000265304 MT-ATP6P00846 226 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 MT-ND1P03886 318 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 TCEA1P23193 301 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms