RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 LMAN2LQ9H0V9 348 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 ZNF629Q9UEG4 869 aaPredicted RBP15.1■□□□□ 0.01
GPC1-201ENST00000264039 SLC27A6Q9Y2P4 619 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 COL5A3P25940 1745 aaPredicted RBP15.1■□□□□ 0.01
GPC1-201ENST00000264039 A8MVJ9 347 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 SYT5O00445 386 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 PLPP1O14494 284 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 DOK2O60496 412 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 SNAPINO95295 136 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 NFYBP25208 207 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 DEFA6Q01524 100 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 EIF4EBP2Q13542 120 aaPredicted RBP15.1■□□□□ 0.01
GPC1-201ENST00000264039 PDZD11Q5EBL8 140 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 ZNF761Q86XN6 746 aaPredicted RBP15.1■□□□□ 0.01
GPC1-201ENST00000264039 FAM219AQ8IW50 185 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 JAGN1Q8N5M9 183 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 WDSUB1Q8N9V3 476 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 GLYATL1Q969I3 302 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 TEAD3Q99594 435 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 NDRG3Q9UGV2 375 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 COL11A1P12107 1806 aaPredicted RBP15.1■□□□□ 0.01
GPC1-201ENST00000264039 GFYI3L273 518 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 HLA-DQB1P01920 261 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 HOXA1P49639 335 aaPredicted RBP15.1■□□□□ 0.01
GPC1-201ENST00000264039 MMP15P51511 669 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 TAS2R38P59533 333 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 SERTAD2Q14140 314 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 EIF2B1Q14232 305 aaKnown RBP15.1■□□□□ 0.01
GPC1-201ENST00000264039 DCUN1D3Q8IWE4 304 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 OR11G2Q8NGC1 345 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 PFN4Q8NHR9 129 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 MRPS24Q96EL2 167 aaKnown RBP15.1■□□□□ 0.01
GPC1-201ENST00000264039 UPB1Q9UBR1 384 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 WDR81Q562E7 1941 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 ANK1P16157 1881 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 SURF4O15260 269 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 SOCS5O75159 536 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 ZNF254O75437 659 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 HLA-AP01891 365 aaKnown RBP15.09■□□□□ 0.01
GPC1-201ENST00000264039 HIST1H2ABP04908 130 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 C1SP09871 688 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 AGTR1P30556 359 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 PXNP49023 591 aaPredicted RBP15.09■□□□□ 0.01
GPC1-201ENST00000264039 EPHA4P54764 986 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 TMEM255AQ5JRV8 349 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 DCAF12L2Q5VW00 463 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 RBMS3Q6XE24 437 aaKnown RBP15.09■□□□□ 0.01
GPC1-201ENST00000264039 GLDNQ6ZMI3 551 aaPredicted RBP15.09■□□□□ 0.01
GPC1-201ENST00000264039 TTLL10Q6ZVT0 673 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 HIST3H2AQ7L7L0 130 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 DCUN1D4Q92564 292 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 HIST1H2ACQ93077 130 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 HS6ST2Q96MM7 605 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 FOXN4Q96NZ1 517 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 RSPH9Q9H1X1 276 aaPredicted RBP15.09■□□□□ 0.01
GPC1-201ENST00000264039 TSPAN10Q9H1Z9 355 aaPredicted RBP15.09■□□□□ 0.01
GPC1-201ENST00000264039 GLIPR2Q9H4G4 154 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 CBLCQ9ULV8 474 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 A0A1B0GUH1 482 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 AKR7A3O95154 331 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 RAB3DO95716 219 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 PRH1P02810 166 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 NT5EP21589 574 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 S100A2P29034 98 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 BTCP35070 178 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 SLC11A1P49279 550 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 RAB2AP61019 212 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 PUSL1Q8N0Z8 303 aaKnown RBP15.09■□□□□ 0.01
GPC1-201ENST00000264039 MUC20Q8N307 709 aaPredicted RBP15.09■□□□□ 0.01
GPC1-201ENST00000264039 COX18Q8N8Q8 333 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 OR5M9Q8NGP3 310 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 SYT4Q9H2B2 425 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 SLC38A1Q9H2H9 487 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 NAP1L6A6NFF2 107 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 LATS1O95835 1130 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 NQO2P16083 231 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 CNR1P21554 472 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 RPS27P42677 84 aaKnown RBP15.09■□□□□ 0.01
GPC1-201ENST00000264039 LSSP48449 732 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 SNTB1Q13884 538 aaKnown RBP15.09■□□□□ 0.01
GPC1-201ENST00000264039 NNATQ16517 81 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 MAPK14Q16539 360 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 PRSS53Q2L4Q9 553 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 GIMAP5Q96F15 307 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 PCDHGA5Q9Y5G8 931 aa15.09■□□□□ 0.01
GPC1-201ENST00000264039 OR6C65A6NJZ3 312 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 IDSB3KWA1 339 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 SLC35G4P0C7Q5 338 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 FAM157BP0CG42 384 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 SREBF2Q12772 1141 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 POU4F2Q12837 409 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 ZNF155Q12901 538 aaPredicted RBP15.08■□□□□ 0.01
GPC1-201ENST00000264039 CDNFQ49AH0 187 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 STX12Q86Y82 276 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 OR51D1Q8NGF3 324 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 OR14A16Q8NHC5 309 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 GAL3ST3Q96A11 431 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 FKRPQ9H9S5 495 aa15.08■□□□□ 0.01
GPC1-201ENST00000264039 SIDT1Q9NXL6 827 aaKnown RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms