RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 EGFP01133 1207 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 SCG5P05408 212 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 RPS19P39019 145 aaKnown RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 SLC1A3P43003 542 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 SOX9P48436 509 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 TAS2R19P59542 299 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 GPR18Q14330 331 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 MRPL2Q5T653 305 aaKnown RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 TANGO2Q6ICL3 276 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 FAM83HQ6ZRV2 1179 aaPredicted RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 SERINC5Q86VE9 423 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 CMTM1Q8IZ96 169 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 TMEM255BQ8WV15 326 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 ACOT11Q8WXI4 607 aaPredicted RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 OCSTAMPQ9BR26 566 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 C20orf85Q9H1P6 137 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 SLC2A4RGQ9NR83 387 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 C19orf12Q9NSK7 152 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 PURGQ9UJV8 347 aaKnown RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 TCRBP04435 133 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 GIPRP48546 466 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 EMP2P54851 167 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 LRRC26Q2I0M4 334 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 INAVAQ3KP66 663 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 PRICKLE2Q7Z3G6 844 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 ZNF440Q8IYI8 595 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 TMEM217Q8N7C4 229 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 FIBINQ8TAL6 211 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 SLC38A5Q8WUX1 472 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 MIB2Q96AX9 1013 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 SAT2Q96F10 170 aaPredicted RBP11.25□□□□□ -0.61
SMG6-201ENST00000263073 CDCP1Q9H5V8 836 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 FZD9O00144 591 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 BET1O15155 118 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 SEC14L2O76054 403 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 SCAF4O95104 1147 aaKnown RBP11.25□□□□□ -0.61
SMG6-201ENST00000263073 ATXN1LP0C7T5 689 aaKnown RBP11.25□□□□□ -0.61
SMG6-201ENST00000263073 PXNP49023 591 aaPredicted RBP11.25□□□□□ -0.61
SMG6-201ENST00000263073 HCCSP53701 268 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 SSTP61278 116 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 GLO1Q04760 184 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 CLINT1Q14677 625 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 PLCXD3Q63HM9 321 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 ESPNLQ6ZVH7 1005 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 SLC46A3Q7Z3Q1 461 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 PGBD5Q8N414 524 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 CDRT4Q8N9R6 151 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 OR10R2Q8NGX6 335 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 ZNF28P17035 718 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 AOAHP28039 575 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 IDUAP35475 653 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 CTU2Q2VPK5 515 aaKnown RBP11.25□□□□□ -0.61
SMG6-201ENST00000263073 PXT1Q8NFP0 134 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 TNFRSF13CQ96RJ3 184 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 NMNAT2Q9BZQ4 307 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 NUMA1Q14980 2115 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 CACNA1FO60840 1977 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 PRAMEF27A3QJZ7 478 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 C1orf105O95561 183 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 SDHBP21912 280 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 CCINQ13939 588 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 PAN3Q58A45 887 aaKnown RBP11.25□□□□□ -0.61
SMG6-201ENST00000263073 PRAMEF9Q5VWM5 478 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 OR5D14Q8NGL3 314 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 SLC7A13Q8TCU3 470 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 KHSRPQ92945 711 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMG6-201ENST00000263073 RAB7BQ96AH8 199 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 FAM86C1Q9NVL1 165 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 IGKV6-21A0A0C4DH24 114 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 WASH4PA8MWX3 477 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 CHRM4P08173 479 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 P2RY2P41231 377 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 UBE2MP61081 183 aaKnown RBP11.25□□□□□ -0.61
SMG6-201ENST00000263073 CDK3Q00526 305 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 DEFB133Q30KQ1 61 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 PAPD4Q6PIY7 484 aaKnown RBP11.25□□□□□ -0.61
SMG6-201ENST00000263073 OR4K15Q8NH41 348 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 ZNF587Q96SQ5 575 aaPredicted RBP11.25□□□□□ -0.61
SMG6-201ENST00000263073 PITHD1Q9GZP4 211 aaPredicted RBP11.25□□□□□ -0.61
SMG6-201ENST00000263073 TMEM231Q9H6L2 316 aa11.25□□□□□ -0.61
SMG6-201ENST00000263073 RAB27BO00194 218 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 TGM6O95932 706 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 OR13C7P0DN81 318 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 PLK5Q496M5 336 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 CPEB2Q7Z5Q1 589 aaKnown RBP11.24□□□□□ -0.61
SMG6-201ENST00000263073 RBM45Q8IUH3 476 aaKnown RBP11.24□□□□□ -0.61
SMG6-201ENST00000263073 VRK3Q8IV63 474 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 PIGCQ92535 297 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 PGAP3Q96FM1 320 aaPredicted RBP11.24□□□□□ -0.61
SMG6-201ENST00000263073 NMNAT3Q96T66 252 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 RBFOX1Q9NWB1 397 aaKnown RBP11.24□□□□□ -0.61
SMG6-201ENST00000263073 WSB2Q9NYS7 404 aaPredicted RBP11.24□□□□□ -0.61
SMG6-201ENST00000263073 DUX1O43812 170 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 MGST1P10620 155 aaKnown RBP11.24□□□□□ -0.61
SMG6-201ENST00000263073 ADRA1AP35348 466 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 PLGLAQ15195 96 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 YOD1Q5VVQ6 348 aaPredicted RBP11.24□□□□□ -0.61
SMG6-201ENST00000263073 FUNDC1Q8IVP5 155 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 ABHD4Q8TB40 342 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 SPTSSAQ969W0 71 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms