RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PIM3Q86V86 326 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 WFDC8Q8IUA0 241 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 BPIFB2Q8N4F0 458 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 STEAP2Q8NFT2 490 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 DNERQ8NFT8 737 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ARRDC2Q8TBH0 407 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ORAOV1Q8WV07 137 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ORAI1Q96D31 301 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 DAZAP1Q96EP5 407 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 TMEM176AQ96HP8 235 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 OR2M2Q96R28 347 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 SEC11CQ9BY50 192 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 EXOSC3Q9NQT5 275 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 EXOSC1Q9Y3B2 195 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 MTCH2Q9Y6C9 303 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ABCA3Q99758 1704 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CICQ96RK0 1608 aaPredicted RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 KAT6AQ92794 2004 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 WDR90Q96KV7 1748 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 A0A1W2PR48 441 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 C9J4A7 227 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 K7ERU9 68 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 MANBAO00462 879 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 MDM4O15151 490 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 KIAA0513O60268 411 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 B4GALT2O60909 372 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 SPATA31C1P0DKV0 1188 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 MAKP20794 623 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 ANOS1P23352 680 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 NFYAP23511 347 aaPredicted RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 ITPKBP27987 946 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 SDC4P31431 198 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 SLC6A4P31645 630 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 GKP32189 559 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 RPL29P47914 159 aaKnown RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 TTPAP49638 278 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 RGS4P49798 205 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 AKR1C2P52895 323 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 AKR1C1Q04828 323 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 CDK5R2Q13319 367 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 CCDC85BQ15834 202 aaPredicted RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 VMACQ2NL98 169 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 TMEM177Q53S58 311 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 LRRC73Q5JTD7 316 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 COL5A1-AS1Q5SY13 56 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 YRDCQ86U90 279 aaKnown RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 NRROSQ86YC3 692 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 DNAJC5GQ8N7S2 189 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 PI4KAP1Q8N8J0 262 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 TMEM161BQ8NDZ6 487 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 OR10A6Q8NH74 314 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 RHBDD1Q8TEB9 315 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 CTHRC1Q96CG8 243 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 PRRC1Q96M27 445 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 OR2V2Q96R30 315 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 DDOQ99489 341 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 OR51E2Q9H255 320 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 RAB6BQ9NRW1 208 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 DDIT4Q9NX09 232 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 CNIH4Q9P003 139 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 DOK5Q9P104 306 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 SLC13A4Q9UKG4 626 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 CMAHPQ9Y471 501 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 TEX264Q9Y6I9 313 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 ATAD5Q96QE3 1844 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 ZFC3H1O60293 1989 aaKnown RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 TIAM2Q8IVF5 1701 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 UBA6A0AVT1 1052 aaPredicted RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 SMCO3A2RU48 225 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 PPP1R2P9O14990 202 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 CFHP08603 1231 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 SULT1A3P0DMM9 295 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 SULT1A4P0DMN0 295 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 SLC2A2P11168 524 aaPredicted RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 SCGB1A1P11684 91 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 CPT2P23786 658 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 HTR2AP28223 471 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 CHRNB4P30926 498 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 RAB9AP51151 201 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 ERVFRD-1P60508 538 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 TAF9Q16594 264 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 XKR6Q5GH73 641 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 PGBD2Q6P3X8 592 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 USP17L2Q6R6M4 530 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 GSG1LQ6UXU4 331 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 PTRH1Q86Y79 214 aaKnown RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 TOP6BLQ8N6T0 577 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 C4orf32Q8N8J7 132 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 RELL2Q8NC24 303 aaPredicted RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 OR51S1Q8NGJ8 323 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 CNIH3Q8TBE1 160 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 ASB17Q8WXJ9 295 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 MRPS31Q92665 395 aaKnown RBP7.17□□□□□ -1.26
GPNMB-201ENST00000258733 SLC41A2Q96JW4 573 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 CST9LQ9H4G1 147 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 MYOTQ9UBF9 498 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 NPTNQ9Y639 398 aa7.17□□□□□ -1.26
GPNMB-201ENST00000258733 ROBO3Q96MS0 1386 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 ANKRD20A5PA0PJZ0 165 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 TMEM150BA6NC51 233 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms