RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CT45A9P0DMV2 189 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 SLC2A1P11166 492 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 CXCR1P25024 350 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 EDNRAP25101 427 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 GRK6P43250 576 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 EFNA3P52797 238 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 WNT4P56705 351 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 BTBD16Q32M84 506 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 CT45A2Q5DJT8 189 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 PRSS45Q7RTY3 260 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 DPY19L4Q7Z388 723 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 SLC2A12Q8TD20 617 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 APOBEC4Q8WW27 367 aaKnown RBP8.35□□□□□ -1.07
CKAP2-201ENST00000258607 SMURF1Q9HCE7 757 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 ACOXLQ9NUZ1 547 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 OCIAD1Q9NX40 245 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 TAS2R7Q9NYW3 318 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 HS3ST3A1Q9Y663 406 aa8.35□□□□□ -1.07
CKAP2-201ENST00000258607 IGHV1OR21-1A0A087WYE8 117 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 A0A1W2PNR3 127 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 OR5K4A6NMS3 321 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 DCTN6O00399 190 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 PRODHO43272 600 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 HIST1H2ABP04908 130 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 HEXBP07686 556 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 SRP9P49458 86 aaKnown RBP8.34□□□□□ -1.07
CKAP2-201ENST00000258607 CCL7P80098 99 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 MRPS15P82914 257 aaKnown RBP8.34□□□□□ -1.07
CKAP2-201ENST00000258607 LYSMD4Q5XG99 296 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 PWWP2BQ6NUJ5 590 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 FAAP20Q6NZ36 180 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 C1orf94Q6P1W5 598 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 QSOX2Q6ZRP7 698 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 RNF165Q6ZSG1 346 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 HIST3H2AQ7L7L0 130 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 STT3BQ8TCJ2 826 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 HIST1H2ACQ93077 130 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 OR14A2Q96R54 314 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 TUBA1CQ9BQE3 449 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 PPIL3Q9H2H8 161 aaKnown RBP8.34□□□□□ -1.07
CKAP2-201ENST00000258607 GPN2Q9H9Y4 310 aaPredicted RBP8.34□□□□□ -1.07
CKAP2-201ENST00000258607 MED29Q9NX70 200 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 POLR1DQ9Y2S0 133 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 IGHV3-15A0A0B4J1V0 119 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 A0A1W2PQ09 198 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 SCRG1O75711 98 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 UTS2O95399 124 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 TP53P04637 393 aaPredicted RBP8.34□□□□□ -1.07
CKAP2-201ENST00000258607 SPARCP09486 303 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 SNRPBP14678 240 aaKnown RBP8.34□□□□□ -1.07
CKAP2-201ENST00000258607 GABRB1P18505 474 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 CD97P48960 835 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 SH3BGRP55822 239 aaPredicted RBP8.34□□□□□ -1.07
CKAP2-201ENST00000258607 TUBA3CQ13748 450 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 MBOAT2Q6ZWT7 520 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 CCDC80Q76M96 950 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 NANOGNBQ7Z5D8 188 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 JAZF1Q86VZ6 243 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 ACBD7Q8N6N7 88 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 ACBD4Q8NC06 268 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 PCNPQ8WW12 178 aaKnown RBP8.34□□□□□ -1.07
CKAP2-201ENST00000258607 OSTF1Q92882 214 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 PTP4A1Q93096 173 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 KCTD7Q96MP8 289 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 CRB3Q9BUF7 120 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 BTBD2Q9BX70 525 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 B3GAT2Q9NPZ5 323 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 ENTPD2Q9Y5L3 495 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 R4GN57 208 aa8.34□□□□□ -1.07
CKAP2-201ENST00000258607 SERTM1A2A2V5 107 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 SEC14L5O43304 696 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF354AO60765 605 aaPredicted RBP8.33□□□□□ -1.08
CKAP2-201ENST00000258607 APOA1P02647 267 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 SLC35E2P0CK97 266 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF3P17036 446 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 DRD5P21918 477 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 OTX2P32243 289 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 TMED10P49755 219 aaKnown RBP8.33□□□□□ -1.08
CKAP2-201ENST00000258607 FXYD6P3P58550 94 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 OC90Q02509 493 aaPredicted RBP8.33□□□□□ -1.08
CKAP2-201ENST00000258607 PLAURQ03405 335 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 E2F2Q14209 437 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 HLA-BQ31612 363 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 ARHGAP11BQ3KRB8 267 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 LCN10Q6JVE6 187 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 CADM3Q8N126 398 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 KLHL36Q8N4N3 616 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 METTL21AQ8WXB1 218 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 SLC30A2Q9BRI3 323 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 VN1R1Q9GZP7 353 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 MCUBQ9NWR8 336 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 PCDHGB6Q9Y5F9 930 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 SPG11Q96JI7 2443 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 LMO7DNF2Z398 122 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 LAMTOR5O43504 91 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 BRINP1O60477 761 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 PRAMEF2O60811 474 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 IGHV3-9P01782 118 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 SYPP08247 313 aa8.33□□□□□ -1.08
CKAP2-201ENST00000258607 CD3GP09693 182 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms